| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,546,866 | T→C | 9.0% | intergenic (+22/+18) | PP_2238 → / ← PP_5504 | metallopeptidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,546,866 | 0 | T | C | 9.0% | 218.2 / 9.5 | 78 | intergenic (+22/+18) | PP_2238/PP_5504 | metallopeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (37/34); new base C (3/4); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-01 | |||||||||||
GAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGGCGCT > NC_002947/2546719‑2547015 | gAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGc < 1:188163/150‑1 (MQ=255) aCCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGccc < 2:1827986/150‑1 (MQ=255) aCCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGccc < 2:508257/150‑1 (MQ=255) ccAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCt < 2:530212/150‑1 (MQ=255) cAAGGAGGCGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtt > 2:2135236/1‑150 (MQ=255) cAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtt > 1:1606745/1‑150 (MQ=255) cAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATCAATAGTTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtt < 1:1969521/150‑1 (MQ=255) aggaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtttt < 2:463410/150‑1 (MQ=255) ggaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGc > 1:848937/1‑136 (MQ=255) ggaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGc < 2:848937/136‑1 (MQ=255) gaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTtct < 2:1758048/150‑1 (MQ=255) ggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTAtt < 2:996434/150‑1 (MQ=255) gTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAAc > 2:391192/1‑133 (MQ=255) gTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAAc < 1:391192/133‑1 (MQ=255) ggAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTAc < 2:994805/150‑1 (MQ=255) tGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgat < 2:1606745/150‑1 (MQ=255) tGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGAACGGCACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgat > 1:1971852/1‑150 (MQ=255) gCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatga > 2:2057477/1‑150 (MQ=255) tGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTGTTTTCAgttgatt > 2:2352357/1‑149 (MQ=255) aaCGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatgat > 2:1576164/1‑150 (MQ=255) ccGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATc < 1:356526/149‑1 (MQ=255) cTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTAc > 1:1853998/1‑135 (MQ=255) cTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTAc < 2:1853998/135‑1 (MQ=255) cTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCt < 2:859261/113‑1 (MQ=255) cTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCt > 1:859261/1‑113 (MQ=255) aCATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGc < 1:2135236/150‑1 (MQ=255) cgcCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAAAGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCgg < 1:2306822/150‑1 (MQ=255) gcCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCggg > 1:6307/1‑150 (MQ=255) cTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGtt < 1:861111/150‑1 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCg < 1:949543/124‑1 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCg > 2:949543/1‑124 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTg > 2:1119727/1‑128 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTg < 1:1119727/128‑1 (MQ=255) cccTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGcc > 1:1237612/1‑150 (MQ=255) ttGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGaa > 2:2138701/1‑150 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACaaa > 2:318251/1‑150 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACaaa > 2:2014397/1‑150 (MQ=255) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCTCCGTGTTGATGCCGAACaaaga > 2:1723423/1‑148 (MQ=255) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATa > 1:1055394/1‑150 (MQ=255) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGcc > 1:1646425/1‑80 (MQ=39) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGcc < 2:1646425/80‑1 (MQ=39) ggATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCAc < 1:246921/150‑1 (MQ=255) gATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCAcc > 1:2070257/1‑150 (MQ=255) aTGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCg < 2:1055394/150‑1 (MQ=255) gcTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCct > 2:2209746/1‑150 (MQ=255) tAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCctct > 1:809371/1‑150 (MQ=255) ccTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCa < 1:2014397/150‑1 (MQ=255) tggAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTa > 2:412021/1‑150 (MQ=255) ggAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGtt > 1:2102634/1‑112 (MQ=255) ggAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGtt < 2:2102634/112‑1 (MQ=255) gaTGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCGGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGc < 2:1477254/144‑1 (MQ=255) gaTGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCGGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGc > 1:1477254/1‑144 (MQ=255) gTANTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAg > 2:1497376/1‑150 (MQ=255) aCTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTa > 1:1121841/1‑90 (MQ=255) aCTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTa < 2:1121841/90‑1 (MQ=255) tGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATa < 2:984206/115‑1 (MQ=255) tGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATa > 1:984206/1‑115 (MQ=255) aCCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCaa > 1:2170918/1‑150 (MQ=255) tGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAcc > 1:912159/1‑150 (MQ=255) tGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAcc > 2:1178267/1‑150 (MQ=255) tGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAcc < 1:1218248/150‑1 (MQ=255) gTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAccc < 2:2322945/150‑1 (MQ=255) gTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAccc > 1:2322945/1‑150 (MQ=255) aaCGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTATCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCgg < 1:34995/150‑1 (MQ=255) aCGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTa < 1:1849106/125‑1 (MQ=255) aCGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTa > 2:1849106/1‑125 (MQ=255) cGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTa < 1:978391/150‑1 (MQ=255) gCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCa > 1:2427680/1‑58 (MQ=255) gCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCa < 2:2427680/58‑1 (MQ=255) cAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGc < 1:1178267/150‑1 (MQ=255) aGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGcc < 2:1120598/150‑1 (MQ=255) gagaaaaGGGCAGTTCGCAAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCcgcg > 1:1601002/4‑150 (MQ=255) aaaGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATTATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGtg > 1:503833/1‑150 (MQ=255) aaGGGCAGTTCGCAAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGtgc > 2:384679/1‑150 (MQ=255) ggacAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGtgctg > 2:1674103/4‑150 (MQ=255) gCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCCTTGTACTGGAGGGTG‑ATCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCa < 2:62815/150‑1 (MQ=255) cAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAg < 2:1971852/150‑1 (MQ=255) gTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTTCTGCAGgc > 2:381279/1‑150 (MQ=255) tttGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGc > 1:1511747/1‑73 (MQ=255) tttGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGc < 2:1511747/73‑1 (MQ=255) tttGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGgcg < 1:1674103/150‑1 (MQ=255) tGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGGCGCt < 2:2170918/150‑1 (MQ=255) | GAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCTGGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCT‑CCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGGCGCT > NC_002947/2546719‑2547015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |