| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,581,646 | G→A | 9.8% | S275S (TCG→TCA) | PP_2262 → | sugar ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,581,646 | 0 | G | A | 9.8% | 217.3 / 11.0 | 81 | S275S (TCG→TCA) | PP_2262 | sugar ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (32/41); new base A (5/3); total (37/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
ACCGAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGATCCT > NC_002947/2581497‑2581795 | acCGAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCg > 2:13852/1‑150 (MQ=255) ccGAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACACTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTACTGATCATCCTGCTGGTGTCGt < 2:95740/150‑1 (MQ=255) gAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTgg < 1:1186094/150‑1 (MQ=255) gAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTgg < 2:1023406/150‑1 (MQ=255) cGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGTGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCATGGCTGt > 2:385884/1‑150 (MQ=255) ttCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTc > 1:1058122/1‑150 (MQ=255) tCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCt < 2:1963872/150‑1 (MQ=255) cGTGCTGACCGGCCGCGGGCCATGCAATTCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTa < 1:111720/150‑1 (MQ=255) tGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAg < 1:1894045/150‑1 (MQ=255) cggcggcggGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCAt < 2:2258402/150‑1 (MQ=255) cggcggcggGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCAt < 1:1229188/150‑1 (MQ=255) gcggcggGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGa < 1:13852/150‑1 (MQ=255) gcggcggGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGa < 2:1576223/150‑1 (MQ=255) cggcggGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTAGTGGCTGTTCTA‑CA‑CAGCCATGAc < 1:420955/150‑1 (MQ=255) atctcggcgttgctcttgaacgacatgttcagcaaccagtagatcggcactagcaggaagaagaagtacagcagcagggccattgatttgcgtttgctcatggcctagtccttgtcggcatagGTCATGGCTGTTCTA‑CA‑CAGCCATGAc > 2:1253846‑M1/124‑150 (MQ=255) cAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCGAGAGTGTCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCg > 1:1329374/1‑150 (MQ=255) cAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCAt > 2:2358985/1‑139 (MQ=255) cAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCAt < 1:2358985/139‑1 (MQ=255) ggCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGTGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGAc > 2:2122777/1‑150 (MQ=255) aaTGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAg > 1:423856/1‑150 (MQ=255) gCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGAc < 2:2202718/150‑1 (MQ=255) aCCACGTTCCTCAGCAAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCTATGCCGACAAGGACTAg < 2:2041496/150‑1 (MQ=255) cgcGTTCCTCAGCCAGTTCGTCGCGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTACTGATCTTCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGc < 2:802392/148‑1 (MQ=255) cACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGt < 1:1957868/107‑1 (MQ=255) cACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGt > 2:1957868/1‑107 (MQ=255) cACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCt > 1:1574813/1‑116 (MQ=255) cACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCt < 2:1574813/116‑1 (MQ=255) cACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGc > 1:1832463/1‑150 (MQ=255) gTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCAt < 2:1783070/150‑1 (MQ=255) gTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCAt > 1:1293893/1‑150 (MQ=255) gTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCAt < 1:140116/150‑1 (MQ=255) tcagcaaccagtagatcggcaccagcaggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatggcctagtccttgtcggcatggGTCGTGGCTGTTCTA‑CA‑CAGCCATGa < 1:404433‑M1/26‑1 (MQ=255) tcagcaaccagtagatcggcaccagcaggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatggcctagtccttgtcggcatggGTCGTGGCTGTTCTA‑CA‑CAGCCATGa > 2:404433‑M1/96‑121 (MQ=255) ccAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGtt > 2:1521459/1‑102 (MQ=255) ccAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGtt < 1:1521459/102‑1 (MQ=255) ccAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTa‑ca > 2:2448343/1‑107 (MQ=255) ccAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTa‑ca < 1:2448343/107‑1 (MQ=255) cAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGc > 2:290268/1‑150 (MQ=255) aGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGAAAAGAGGTGAGGTGCCGGGGCTGTTCTA‑CA‑CAGCCATGACCCATGACGCCATGTACTTGGCCATGAGGACAAGCa > 1:644544/1‑150 (MQ=255) gACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCaa > 2:1013028/1‑150 (MQ=255) cagtagatcggcaccagcaggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatggcctagtccttgtcggcatggGTCGTGGCTGTTCTA‑CA‑CAGCCATGAc > 1:1627463‑M1/88‑114 (MQ=255) cagtagatcggcaccagcaggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatggcctagtccttgtcggcatggGTCGTGGCTGTTCTA‑CA‑CAGCCATGAc < 2:1627463‑M1/27‑1 (MQ=255) cccTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAAt < 2:2218404/150‑1 (MQ=255) tCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCaa > 1:440746/1‑150 (MQ=255) aCGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATg < 2:2115306/150‑1 (MQ=255) cgTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGcc < 1:2360687/150‑1 (MQ=255) ggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatgacctagtccttgtcggcatggGTCATGGCTGTTCTA‑CA‑CAGCCATGa < 1:1586171‑M1/26‑1 (MQ=255) ggaagaagaagtacagcagcagggccattgatttgcgtgtgctcatgacctagtccttgtcggcatggGTCATGGCTGTTCTA‑CA‑CAGCCATGa > 2:1586171‑M1/69‑94 (MQ=255) gggCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTAc < 2:1832463/150‑1 (MQ=255) ggCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTgg < 1:1187791/71‑1 (MQ=255) ggCAGTTCGACCTGGGGCCGGCGCCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTgg > 2:1187791/1‑71 (MQ=255) gCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTActt > 1:829533/1‑150 (MQ=255) ttCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTActtcttc > 1:1511876/1‑150 (MQ=255) ttCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTActtcttc > 2:2263932/1‑150 (MQ=255) ttCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTActtcttc < 2:423856/150‑1 (MQ=255) gggCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCctgctg > 1:847399/1‑150 (MQ=255) gCGTTTTCACTGCTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCCTGCCGACAAGTACTCGGCTATGCGCACACGCCAATCACTGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTAc < 2:1329374/150‑1 (MQ=255) gTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGCCAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTg < 1:290268/150‑1 (MQ=255) gTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTg < 1:2442722/150‑1 (MQ=255) ttttCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTgg > 2:1416019/1‑150 (MQ=255) ttCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGtt > 2:371908/1‑150 (MQ=255) ttCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACAAGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGtt < 2:644544/150‑1 (MQ=255) ttCACTGGTGTACTTCCTGATCATCCTGCTCGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGtt < 1:1938273/150‑1 (MQ=255) tGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGa > 2:2283155/1‑150 (MQ=255) ggTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGaa > 2:2131044/1‑150 (MQ=255) gtACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACttcttcttc > 2:2032631/1‑118 (MQ=255) gtACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACttcttcttc < 1:2032631/118‑1 (MQ=255) ttCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCg > 1:1726080/1‑150 (MQ=255) tagtccttgtcggcatggGTCATGGCTGTG‑TAGAA‑CAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGtt < 2:2031668‑M1/132‑1 (MQ=255) tccttgtcggcatggGTCATGGCTGTG‑TAGAA‑CAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCaa > 1:2031668‑M1/16‑150 (MQ=255) gATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACCCGCAAAGCAATGGCCCTGCTGCTGTACTTCTTCATCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCaa > 1:1114632/1‑150 (MQ=255) atcatcCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAATGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAag > 2:2179248/1‑150 (MQ=255) tcatcCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAaga < 1:371908/150‑1 (MQ=255) tcatcCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCAATGAGCACACGCCGGTCAATGGCCCTGCTTCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAaga < 1:2122777/150‑1 (MQ=255) ttgtcggcatggGTCATGGCTGTG‑TA‑GAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTgg > 1:999337‑M1/13‑127 (MQ=255) ttgtcggcatggGTCATGGCTGTG‑TA‑GAACAGCCACGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTgg < 2:999337‑M1/115‑1 (MQ=255) tcCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCa > 1:527971/1‑150 (MQ=255) tgGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGa < 2:1869908/57‑1 (MQ=255) tgGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGa > 1:1869908/1‑57 (MQ=255) ggTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGNCga < 2:1511876/150‑1 (MQ=255) ggTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCga < 2:440746/150‑1 (MQ=255) tgtCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCgaga < 2:527971/150‑1 (MQ=255) gTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGATCCt > 2:808247/1‑150 (MQ=255) | ACCGAACCGTTCGTGCTGACCGGCGGCGGGCCAGGCAATGCGACCACGTTCCTCAGCCAGACCCTCACGCGTATGGCTGTAGGGCAGTTCGACCTGGGGCCGGCGGCAGCGTTTTCACTGGTGTACTTCCTGATCATCCTGCTGGTGTCGTGGCTGTTCTA‑CA‑CAGCCATGACCCATGCCGACAAGGACTAGGCCATGAGCACACGCAAATCAATGGCCCTGCTGCTGTACTTCTTCTTCCTGCTGGTGCCGATCTACTGGTTGCTGAACATGTCGTTCAAGAGCAACGCCGAGATCCT > NC_002947/2581497‑2581795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |