| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,651,319 | G→C | 8.4% | intergenic (+41/+29) | PP_2323 → / ← aroF‑I | hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,651,319 | 0 | G | C | 8.4% | 254.7 / 13.4 | 83 | intergenic (+41/+29) | PP_2323/aroF‑I | hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (39/37); new base C (3/4); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.67e-01 | |||||||||||
GGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATC > NC_002947/2651176‑2651467 | ggCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCg < 1:1942672/150‑1 (MQ=255) gCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCgg > 1:1981007/1‑150 (MQ=255) ctctGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGc < 1:1709699/150‑1 (MQ=255) tctGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCACTGCCCGGCg < 2:1101760/150‑1 (MQ=255) tctGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCACTGCCCGGCg < 2:1100629/150‑1 (MQ=255) tctGGAGTACGCCGAGCAGATGGGGTACACGGTGATAACGTCTTGCTCATATGTGGAACGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCAACAGACACAACAAAAAACG‑CCGGGCAGTGCACGGCg > 1:362910/1‑150 (MQ=255) gAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGtttt > 2:321085/1‑150 (MQ=255) aGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGttttt < 2:2115697/150‑1 (MQ=255) cGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCAtt > 1:2007117/1‑150 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCGCCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTc > 2:1550128/1‑150 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTc > 2:179812/1‑150 (MQ=255) tGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGtt > 1:2447451/1‑150 (MQ=255) tGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTa < 1:1524123/150‑1 (MQ=255) tGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTa < 2:963132/150‑1 (MQ=255) ccGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTg > 2:1067718/1‑150 (MQ=255) ccGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTg > 2:1048684/1‑150 (MQ=255) gTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCg < 2:2007117/150‑1 (MQ=255) ttGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGgca < 1:804426/150‑1 (MQ=255) atatGTGGAGCGTTACATTGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACg < 1:2060989/136‑1 (MQ=255) atatGTGGAGCGTTACATTGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACg > 2:2060989/1‑136 (MQ=255) tatGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGcaca < 1:1312868/148‑1 (MQ=255) tatGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGcaca > 2:1312868/1‑148 (MQ=255) gtgGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCtt < 2:2071541/150‑1 (MQ=255) gtgCAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCtt < 1:2453243/150‑1 (MQ=255) cGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACGATCGTGTTG‑GTCCGGCGTTTTTCATTCCCGCAATGTTCAGACGCGCTTACGCTGCGGCAGCACATCCTTGAGCtt > 1:42721/1‑150 (MQ=255) ttACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTgg > 2:579270/1‑150 (MQ=255) ttACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTgg < 1:1583295/150‑1 (MQ=255) cATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcat > 2:952158/1‑150 (MQ=255) aTGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGt > 1:1036175/1‑105 (MQ=255) aTGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGt < 2:1036175/105‑1 (MQ=255) aGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGcatgcatg < 2:1981007/150‑1 (MQ=255) gcgcCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACCGGGACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATTCTTGAGCTTGGCatgcatgc > 2:2169207/1‑150 (MQ=255) gcgcCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTg > 1:391908/1‑140 (MQ=255) gcgcCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTg < 2:391908/140‑1 (MQ=255) ccAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCAtgctgc > 1:221504/1‑150 (MQ=255) gcagcGGCATTCGCGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCTGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCa < 2:1323240/150‑1 (MQ=255) gcagcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCATCACCTCCTGGAGCTTGGCGTGCATGCTGCGCa > 2:124359/1‑150 (MQ=255) cagcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAg < 2:221504/150‑1 (MQ=255) agcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAgg < 1:321085/150‑1 (MQ=255) agcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAgg > 2:1548081/1‑150 (MQ=255) tCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTtctc < 2:207207/150‑1 (MQ=255) tCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTtctc < 2:2227788/150‑1 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCgg > 2:1589887/1‑150 (MQ=255) aGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgcaag < 2:1174500/130‑3 (MQ=255) aGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGcatgcatg > 1:1174500/1‑130 (MQ=255) gCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGATCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTa < 1:2017222/150‑1 (MQ=255) gCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTa < 1:1589887/150‑1 (MQ=255) cAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAg > 2:2220945/1‑150 (MQ=255) gCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGa > 1:1432387/1‑150 (MQ=255) ccTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATGCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGAc < 2:42721/150‑1 (MQ=255) tGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGTGCACTGCCCGGCGtt < 1:482073/55‑1 (MQ=255) tGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCa < 1:1067718/150‑1 (MQ=255) tGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCACTGCCCGGCGtt > 2:482073/1‑55 (MQ=255) tGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGa < 1:1548081/150‑1 (MQ=255) acgacAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTc > 1:654946/1‑146 (MQ=255) acgacAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTc > 1:654667/1‑146 (MQ=255) acgacAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTc < 2:654667/146‑1 (MQ=255) acgacAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTc < 2:654946/146‑1 (MQ=255) acgacAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGCTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATg > 2:49843/1‑150 (MQ=255) acAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAg < 1:1431912/150‑1 (MQ=255) aGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAg > 1:313790/1‑96 (MQ=255) aGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAg < 2:313790/96‑1 (MQ=255) ccAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCg > 1:132332/1‑150 (MQ=255) cAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGt > 1:393213/1‑150 (MQ=255) gACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGa < 1:179812/150‑1 (MQ=255) acaacaAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCg > 2:1767873/1‑150 (MQ=255) aacaaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAg < 1:1054464/135‑1 (MQ=255) aacaaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAg > 2:1054464/1‑135 (MQ=255) acaaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgcat < 1:784664/94‑1 (MQ=255) acaaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgcat > 2:784664/1‑94 (MQ=255) caaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCtt > 1:993751/1‑78 (MQ=255) caaAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCtt < 2:993751/78‑1 (MQ=255) aaaaaaCG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACg < 1:579270/150‑1 (MQ=255) cggaccG‑CCGGGCCGGGCCGGGCGTTGTGCAGCCCCGCAGCGTAAAGCCGCGCTTACGCTGCGGCAGGACACCCTGGAGCTGGGCCTGCCTGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGGCACGc < 2:558671/145‑1 (MQ=255) aaaaaCG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCa < 1:997393/130‑1 (MQ=255) aaaaaCG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCa > 2:997393/1‑130 (MQ=255) aaaaCG‑CCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGcc > 2:1129257/1‑150 (MQ=255) cG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATAc > 1:193314/1‑150 (MQ=255) cG‑CCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGt < 2:2185108/130‑1 (MQ=255) cG‑CCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGt > 1:2185108/1‑130 (MQ=255) g‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACt > 1:2422020/1‑150 (MQ=255) gCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCaaa > 1:2172319/1‑150 (MQ=255) aGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATc > 1:2361328/1‑150 (MQ=255) | GGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAACAAAAAACG‑CCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCGCGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGCTGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATC > NC_002947/2651176‑2651467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |