| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,816,637 | T→A | 9.6% | I21N (ATT→AAT) | PP_2472 → | MerR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,816,637 | 0 | T | A | 9.6% | 297.7 / 19.4 | 106 | I21N (ATT→AAT) | PP_2472 | MerR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (46/49); new base A (4/6); total (51/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.85e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCG > NC_002947/2816489‑2816785 | ccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAtt > 1:992134/1‑150 (MQ=255)ccAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTAGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAtt > 2:464688/1‑150 (MQ=255) aCAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGa > 2:161127/1‑150 (MQ=255) ccggtgAAGAGATCCCGATCACCGCACGTCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGCGGCCTATGCTGTAACCAAGCCATAACGACGAACTGCCCCCCATACCCGGCAAACGCTACTTCACCATTGGTGaa < 2:796834/145‑1 (MQ=255) aGGTGAAGACATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAg < 1:927832/150‑1 (MQ=255) ggggAAGAGATCCCGACCACCACATGGCGCGTCGTCACCTTTCGTCCAGGGCAGACGTTGAAGCCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCAACATTGGTGACGt < 2:1216056/150‑1 (MQ=255) gggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta < 1:2238459/150‑2 (MQ=255) gggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta < 2:1885905/150‑2 (MQ=255) gggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACAAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta < 1:1693738/150‑2 (MQ=255) ggAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTGGAAGTCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAACCGCTACTTCACCATTGGTGAAGTG‑a > 2:210007/1‑150 (MQ=255) gAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGtagc < 2:2215377/150‑4 (MQ=255) gAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGATGAGGCCTATGCAGGAACCAAACCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑Ag > 2:866894/1‑150 (MQ=255) ctCCCGATCACCGCACGGCGCGTCGTCACCGTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATTCCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑Gtt < 2:1768236/149‑1 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑Gtt < 2:1767671/150‑1 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑Gtt > 1:79401/1‑150 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑Gtt > 1:1582838/1‑150 (MQ=255) aTCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑Gtt < 1:1101829/150‑1 (MQ=255) tCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTtg > 2:111375/1‑150 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTtgt > 1:100112/1‑150 (MQ=255) cccGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTtgt > 1:100347/1‑150 (MQ=255) cGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTtgtgt < 1:1017240/150‑1 (MQ=255) gATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTG‑AGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGc < 2:1975702/150‑1 (MQ=255) aTCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGc > 2:852262/1‑150 (MQ=255) aCCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGt > 1:687104/1‑150 (MQ=255) gCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTaaa < 2:833844/150‑1 (MQ=255) cACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAg > 1:2130996/1‑150 (MQ=255) gcgTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGGTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCacac > 1:2090820/1‑150 (MQ=255) gcgTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGAAACCAAGCTATAACGACGAACTGACCTCCATACCGGGCAAACGCTACTTCACCATTGTTGAAGTG‑AGCGA‑GTTGTGTTCCGTAAAGCcactc < 2:1061830/150‑3 (MQ=255) tgtcgtcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta > 2:1159504/2‑121 (MQ=255) cgtcgtCACCTTTCGTCCAGGGCAGTAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCAATGGTGAAGta < 1:1159504/122‑2 (MQ=255) tcgtcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGtg > 2:1875324/1‑150 (MQ=255) tcACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGtgctg > 2:1399122/1‑150 (MQ=255) cACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGtgctgc < 1:1516740/150‑1 (MQ=255) aCCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCg < 1:1875324/150‑1 (MQ=255) cGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACGAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTg < 2:314953/150‑1 (MQ=255) aGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGc < 1:852262/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGGACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTTCTGCGGTATTGGGAGCAg < 2:2040865/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg < 2:100347/150‑1 (MQ=255) ggCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg < 2:100112/150‑1 (MQ=255) gCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCACGCCATAACGACGAACTGCACCCCCTACCGCGCAAACGCTACTTCACCATCGGCGAAGCG‑AGCGA‑GTTGTGTGCCGTAAAGCCCCACGTGCTGCGGAATTGGGCGCAgg > 2:892169/1‑150 (MQ=255) cAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGa > 2:2450678/1‑150 (MQ=255) gAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGt < 2:79401/150‑1 (MQ=255) aGTTGCAGGCCCGGGTTGAGGCCTATGATGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTc < 1:106108/150‑1 (MQ=255) aGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTc < 2:1586789/150‑1 (MQ=255) ttGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg < 1:863568/142‑1 (MQ=255) ttGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAg > 2:863568/1‑142 (MQ=255) ggCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGc < 1:2450678/150‑1 (MQ=255) gCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTTGGAGCAGGAGTTCGACCAGCt < 2:2381029/150‑1 (MQ=255) gCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCt > 2:2288782/1‑150 (MQ=255) gCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCACAGCTTTACTG‑AGTGA‑GTTGGGTGCCGTAAAGTCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCt > 1:1861214/1‑150 (MQ=255) cGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGaa < 1:1049939/150‑1 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtg > 1:1574019/1‑146 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtg < 2:1574019/146‑1 (MQ=255) gCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGaa > 1:77602/1‑150 (MQ=255) ccTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtgt < 2:201996/146‑1 (MQ=255) ccTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCtgt > 1:201996/1‑146 (MQ=255) cTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGG‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgc < 1:161127/150‑1 (MQ=255) cTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgc < 2:2130996/150‑1 (MQ=255) tATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgcg > 2:2267166/1‑150 (MQ=255) gCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAgcggcg > 1:349871/1‑150 (MQ=255) cTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGcggcgg < 2:2096296/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCGGCTGAACCCTGTGAAGCGGCggg < 2:2172036/150‑1 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg > 1:2172036/1‑150 (MQ=255) tGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCggg > 1:582184/1‑150 (MQ=255) ccAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCCCAATTGATCGCGCGTAAAGATGTTGT‑TGCC‑CAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAc < 1:1124716/150‑1 (MQ=255) ccAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAc < 2:650250/150‑1 (MQ=255) cAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCTTTTTTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAcc > 1:1004762/1‑150 (MQ=255) cAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAAcc > 2:375120/1‑150 (MQ=255) ccATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAAcc > 2:1530107/1‑125 (MQ=255) ccATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAAcc < 1:1530107/125‑1 (MQ=255) cATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACcggcgg < 1:866894/150‑1 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc < 2:1582838/150‑1 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc > 2:2397773/1‑150 (MQ=255) gacgaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGAGGTATTAc > 2:1308311/1‑150 (MQ=255) gacgaACTGCCCCCCATACCGGACAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc < 1:779913/150‑1 (MQ=255) gaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAg > 1:1025651/1‑150 (MQ=255) gaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAg > 2:367876/1‑150 (MQ=255) gaACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAg < 1:505132/150‑1 (MQ=255) aCTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAg < 1:784726/106‑1 (MQ=255) aCTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAg > 2:784726/1‑106 (MQ=255) ccccccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAg > 1:2022578/1‑150 (MQ=255) ccccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGa > 1:1518075/1‑150 (MQ=255) cccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGAt > 2:752661/1‑150 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAg < 1:1025482/113‑1 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAg > 2:1025482/1‑113 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGcggcgg > 2:220191/1‑119 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGcggcgg < 1:220191/119‑1 (MQ=255) ccATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCGGCGCCAGGagg > 1:184373/1‑148 (MQ=255) cATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGNtgt < 2:1518075/150‑1 (MQ=255) cGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga < 2:349871/150‑1 (MQ=255) aaCGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc < 1:629468/125‑1 (MQ=255) aaCGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAc > 2:629468/1‑125 (MQ=255) tcaCTTCACCAATGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCa > 2:929798/3‑150 (MQ=255) aCTTCACCAATGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGa > 1:172394/1‑150 (MQ=255) ttCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga > 1:2332995/1‑136 (MQ=255) ttCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCtga < 2:2332995/136‑1 (MQ=255) ttCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGAtt > 2:894582/1‑150 (MQ=255) cACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGAAAAGAGCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCg > 1:123285/1‑150 (MQ=255) aCCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGt < 1:2315130/150‑1 (MQ=255) aTTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTgcg > 2:1312640/1‑150 (MQ=255) | CCAAGACAGGGGAAGAGATCCCGATCACCGCACGGCGCGTCGTCACCTTTCGTCCAGGGCAGAAGTTGAAGGCCCGGGTTGAGGCCTATGCTGGAACCAAGCCATAACGACGAACTGCCCCCCATACCGGGCAAACGCTACTTCACCATTGGTGAAGTG‑AGCGA‑GTTGTGTGCCGTAAAGCCACACGTGCTGCGGTATTGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCG > NC_002947/2816489‑2816785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |