| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 243,508 | T→A | 12.2% | *221C (TGA→TGT) ‡ | fkl ← | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 243,508 | 0 | T | A | 12.2% | 243.2 / 24.2 | 90 | *221C (TGA→TGT) ‡ | fkl | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
| Reads supporting (aligned to +/- strand): ref base T (37/42); new base A (4/7); total (41/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.45e-01 | |||||||||||
GGGAGTGCAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCGGCAAGGCGAC > NC_002947/243360‑243654 | gggAGTGCAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAAAGAACTCAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTc > 1:1843076/1‑150 (MQ=255) ggAGTGCAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCANAACGCACACNAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCa < 1:478346/150‑1 (MQ=255) ggAGTGCAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCa < 1:1424667/150‑1 (MQ=255) cAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGGGCAGGCCTGAGGTTGGCGTCAGTCGcc > 2:1275932/1‑150 (MQ=255) gACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGACTGACGCCAAcc < 1:1235654/150‑1 (MQ=255) acacCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGACTGACGCCAAcct < 2:1124742/150‑2 (MQ=255) acCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGcc > 1:301029/1‑150 (MQ=255) acCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGACTGACGCCAAcctca < 2:163684/150‑4 (MQ=255) ccGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGACTGACGCCAAcctcag < 1:188881/150‑5 (MQ=255) cTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTc < 2:2362352/150‑1 (MQ=255) cTTGGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTc < 2:316334/150‑1 (MQ=255) tttGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGcc > 1:210202/1‑141 (MQ=255) tttGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGcc < 2:210202/141‑1 (MQ=255) tttGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCg < 2:860131/150‑1 (MQ=255) tttGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCg < 1:2194311/150‑1 (MQ=255) tttGCCGAGAAGCTGGCCAAATAGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCg > 2:1027937/1‑150 (MQ=255) cGAGAAGCTGGCCAAGTTGAGAAGGTTGTTGCATGAGCAATTCGAGCTTGAAGGCTGCCTGGTCGAAGTGCTGCACAACGCACACAATGGAGAGGGTACAGTGCAGGCCTGAGGGTGGCGTCAATAGCCAACCGCCAGCAGTTCGAtctc > 2:977489/1‑150 (MQ=255) cGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGAtctc < 1:1904468/150‑1 (MQ=255) gagaAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCAAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCg > 2:275043/1‑150 (MQ=255) gaAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGaa > 1:1263055/1‑150 (MQ=255) aGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATa < 2:1793597/150‑1 (MQ=255) tGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGtt < 1:1175252/135‑1 (MQ=255) gggCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGtt > 2:1175252/2‑135 (MQ=255) ccAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCGACCGCCAGCAGTTCGATCTCGAATACCAAgg > 2:1249303/1‑150 (MQ=255) ccAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgg < 2:1823328/150‑1 (MQ=255) cAAATTTGGCGGGTTGTTGCCTGCGCGATTAGCGATTGGGCGCTGCTTGGCCTAATCGCCGCACATCTGACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAggg < 2:1843076/150‑1 (MQ=255) cAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACACGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAggg < 1:161230/150‑1 (MQ=255) cAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATAc < 1:1181275/144‑1 (MQ=255) cAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATAc > 2:1181275/1‑144 (MQ=255) cAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAggg > 2:1291897/1‑150 (MQ=255) cAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAggg < 2:1383983/150‑1 (MQ=255) aaaTTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgggg < 2:316409/150‑1 (MQ=255) aTTGGGCGGGTAGTTGCAGGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGgt < 2:60623/150‑1 (MQ=255) gggCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTa < 1:1027937/150‑1 (MQ=255) gggCGGGTTGTGGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTa < 2:301029/150‑1 (MQ=255) gttgttGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCaa > 2:2037517/1‑107 (MQ=255) gttgttGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCaa < 1:2037517/107‑1 (MQ=255) ttgCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATc > 2:2340508/1‑150 (MQ=255) ttgCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATc > 2:417790/1‑150 (MQ=255) gCATGAGCGCGTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAg < 2:119610/150‑1 (MQ=255) cATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAg < 1:2346104/149‑1 (MQ=255) cATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAg > 2:2346104/1‑149 (MQ=255) aTGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACAAAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGaa > 1:1058267/1‑121 (MQ=255) aTGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACAAAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGaa < 2:1058267/121‑1 (MQ=255) cTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGc > 2:2114169/1‑150 (MQ=255) ttCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAGGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgggg < 1:1735933/123‑1 (MQ=255) ttCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAGGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgggg > 2:1735933/1‑123 (MQ=255) tCGAGCTTGAAGATTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGccc > 2:1268796/1‑150 (MQ=255) aaGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAg < 2:1201693/110‑1 (MQ=255) aaGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAg > 1:1201693/1‑110 (MQ=255) gACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgggg > 2:995836/1‑111 (MQ=255) gACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAgggg < 1:995836/111‑1 (MQ=255) tGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAg < 1:1829004/150‑1 (MQ=255) tGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAg < 2:1010766/150‑1 (MQ=255) tGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAg > 2:1829004/1‑150 (MQ=255) gATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTa < 2:1667275/108‑1 (MQ=255) gATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTa > 1:1667275/1‑108 (MQ=255) gATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTg > 2:2324899/1‑150 (MQ=255) tCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGACTCCCGCCCCCTCGGCGCCATAGGCTTgcg > 2:289164/1‑150 (MQ=255) aaGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTg > 2:1789277/1‑150 (MQ=255) gTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATGAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGaa > 2:1413034/1‑150 (MQ=255) tgctgcACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAg < 1:1874578/150‑1 (MQ=255) gcACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAAt < 1:2181670/150‑1 (MQ=255) cacaACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCa < 1:1674211/129‑1 (MQ=255) cacaACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCa > 2:1674211/1‑129 (MQ=255) caACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTAc < 2:1783481/150‑1 (MQ=255) aaCGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTAcc > 2:954230/1‑150 (MQ=255) acacaAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAgg > 1:2289586/1‑100 (MQ=255) acacaAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAgg < 2:2289586/100‑1 (MQ=255) caAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCa > 1:2014654/1‑150 (MQ=255) ggAAGAGGGTGCAGTGCAGGCATGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGTAATCAGGTCTCCCGCCCCCTCGCCGCCATAGGCTTGCGCTGAAGGGATTAGCAGGCGCCAttt < 2:937840/150‑1 (MQ=255) gAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAg > 1:282515/1‑140 (MQ=255) gAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAg < 2:282515/140‑1 (MQ=255) gAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGAATTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTg < 1:1341393/150‑1 (MQ=255) gtgcagtgcaGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCgg > 2:136541/1‑150 (MQ=255) gtgcagtgcaGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCAAATGGCGcctg < 2:1563785/150‑3 (MQ=255) gtgcagtgcaGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCAAATGGCGcctg < 1:275043/150‑3 (MQ=255) gtgcagtgcaGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGAGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTAAAGGAATTACCAGGCGCCAAATGGCGcctg < 2:1775362/150‑3 (MQ=255) gcagtgcagGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGgtg > 1:968379/1‑150 (MQ=255) tgctggcggTTGGCGACTGACGCCAACCTCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCAtttt > 1:2190185/8‑150 (MQ=255) gctggcggTTGGCGACTGACGCCAACCTCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTc < 2:2190185/144‑1 (MQ=255) ccTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATATAGTATATAATGGGGGTGTAGGGTGCAAACAGGGCTCCCGCCACCTAGGCGCCATGGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCg > 1:1863391/1‑150 (MQ=255) tggcggTTGGCGACTGACGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTgc < 2:2083934/99‑1 (MQ=255) tggcggTTGGCGACTGACGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTgc > 1:2083934/5‑103 (MQ=255) cTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCgg < 2:2429435/150‑1 (MQ=255) gcggTTGGCGACTGACGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGaa > 1:2033593/3‑107 (MQ=255) gcggTTGGCGACTGACGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGaa < 2:2033593/105‑1 (MQ=255) cggTTGGCGACTGACGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCGGCaa > 1:1335113/2‑150 (MQ=255) tGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCGGCAAGGCg > 2:2074031/1‑150 (MQ=255) gCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCGGCAAGGCGAc < 1:1413034/150‑1 (MQ=255) | GGGAGTGCAAGGACACCGAACGCTTTGCCGAGAAGCTGGCCAAATTGGGCGGGTTGTTGCATGAGCGCTTCGAGCTTGAAGACTGCCTGATCGAAGTGCTGCACAACGCACACAAGGAAGAGGGTGCAGTGCAGGCCTGAGGTTGGCGTCAGTCGCCAACCGCCAGCAGTTCGATCTCGAATACCAAGGGGGTGTAGGGTGCAATCAGGTCTCCCGCCCCCTCGGCGCCATAGGCTTGCGCTGAAGGAATTACCAGGCGCCATTTGGCGCCGGTGTGCATTTTCGGCAAGGCGAC > NC_002947/243360‑243654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |