| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 250,911 | G→C | 5.7% | R98G (CGC→GGC) | nfeD ← | membrane bound peptidase NefD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 250,911 | 0 | G | C | 5.7% | 390.6 / 12.2 | 122 | R98G (CGC→GGC) | nfeD | membrane bound peptidase NefD |
| Reads supporting (aligned to +/- strand): ref base G (51/64); new base C (4/3); total (55/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TTCATCGTCGCCGCCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGA > NC_002947/250762‑251057 | ttCATCGTCGCCGCCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGcgcg < 1:246502/150‑1 (MQ=255) tCATCGTCGCCGCCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCgg < 2:1360870/150‑1 (MQ=255) aTCGTCGCCGCCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGgc > 1:167302/1‑150 (MQ=255) cgccgcCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCCCGcgccgc < 1:2046187/150‑1 (MQ=255) ccgccTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTg < 1:2417080/150‑1 (MQ=255) cgccTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTgg < 1:669338/150‑1 (MQ=255) gccTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGAATAATTTAGGTTTTTCCCGACAGCCATCGCTGCAATATGGCTGGCGTAGAGAATTTAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTggg < 1:767863/150‑1 (MQ=255) cTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTgg > 2:2137649/1‑147 (MQ=255) tttGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCACTGGGGGc > 1:1284136/1‑150 (MQ=255) cTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGt < 1:2263814/150‑1 (MQ=255) tttATCGTCACTGGGGGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTa > 1:2050211/1‑150 (MQ=255) tttATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCAGCTGGGAGcgcggcg > 2:391912/1‑144 (MQ=255) tCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTg > 2:2134527/1‑150 (MQ=255) tCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCg > 2:599443/1‑150 (MQ=255) cACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGa > 2:217339/1‑150 (MQ=255) cTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACg > 1:2195997/1‑150 (MQ=255) tGGGCGTGCCAGGCGCGCCGCCGATCCGCACCACCGGGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGAAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACgg > 1:1773325/1‑150 (MQ=255) gTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGgcgc < 2:1113159/118‑1 (MQ=255) gTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGgcgc > 1:1113159/1‑118 (MQ=255) ccAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTgggg > 1:773730/1‑123 (MQ=255) ccAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTgggg < 2:773730/123‑1 (MQ=255) cAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGc < 1:1877014/150‑1 (MQ=255) tgggcgccgccacgccggtgcggatcggcggcgcgcAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGgcgc < 1:194942‑M2/76‑1 (MQ=255) tgggcgccgccacgccggtgcggatcggcggcgcgcAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGgcgc > 2:194942‑M2/37‑112 (MQ=255) ggCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTg < 2:390469/150‑1 (MQ=255) ggCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTg < 2:1791298/150‑1 (MQ=255) cgcgcCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTGTAGAATATAGGTGCCGTCGCGGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGga < 1:2122968/150‑1 (MQ=255) gcgcCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAAAGTAGCTGGCGACGGGTACGGTGCTGgag > 1:603048/1‑150 (MQ=255) cgccgATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGCCGGGTACGATGCGGGAGAGaa > 2:1320334/1‑150 (MQ=255) cgccgATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGaa < 1:1093175/150‑1 (MQ=255) cgATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTg > 1:2343427/1‑150 (MQ=255) gATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCggg < 2:2210102/98‑1 (MQ=255) gATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCggg > 1:2210102/1‑98 (MQ=255) gATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTa < 1:311689/117‑1 (MQ=255) gATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGc < 2:568752/150‑1 (MQ=255) aTCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 2:1449903/150‑1 (MQ=255) aTCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc > 2:1292387/1‑150 (MQ=255) aTCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 2:815192/150‑1 (MQ=255) aTCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 1:345893/150‑1 (MQ=255) aTCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGACATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 2:1114434/150‑1 (MQ=255) tCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCt < 1:737656/150‑1 (MQ=255) tCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCt < 2:1129313/150‑1 (MQ=255) ccGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCtt < 2:2050211/150‑1 (MQ=255) gCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGa > 2:195587/1‑150 (MQ=255) gCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGa > 1:1571319/1‑150 (MQ=255) cACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGat < 1:2269304/150‑1 (MQ=255) aCCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTa > 2:2398492/1‑110 (MQ=255) gCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAAtt < 2:2192984/137‑1 (MQ=255) gCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAAtt > 1:2192984/1‑137 (MQ=255) gTGGCGGCGCCCAGGTTGGTCCAGGGTACCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTgg < 1:262/150‑1 (MQ=255) tGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGgc < 1:1320334/150‑1 (MQ=255) cggcgCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCa < 1:458137/150‑1 (MQ=255) ggcgCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCAt < 1:2312171/150‑1 (MQ=255) cgcCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGATAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATgg < 1:1455149/150‑1 (MQ=255) cgcCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATgg < 1:2010207/150‑1 (MQ=255) cccAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCa > 1:1549059/1‑150 (MQ=255) ccAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTgggg > 2:1835571/1‑86 (MQ=255) ccAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 2:2097975/128‑1 (MQ=255) ccAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc > 1:2097975/1‑128 (MQ=255) ccAGGGTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCAc > 2:1806974/1‑150 (MQ=255) cAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc > 2:2402571‑M2/2‑127 (MQ=255) cAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 1:2402571‑M2/126‑1 (MQ=255) aGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTg > 2:1629048/1‑150 (MQ=255) ggTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGt < 2:1909515/150‑1 (MQ=255) tGGTCCCGGGCGCCATCGCTGACATATGGCTGGCGTAGAGCATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCa < 2:2343427/150‑1 (MQ=255) ggTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAg < 1:2055072/150‑1 (MQ=255) tCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGcc < 2:502308/119‑1 (MQ=255) ccGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAgcccg > 2:1743800/1‑150 (MQ=255) gggCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAgcccgcc > 2:1035191/1‑150 (MQ=255) tCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATgg > 2:2133046/1‑126 (MQ=255) tCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATgg < 1:2133046/126‑1 (MQ=255) gCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATcc < 1:1629048/150‑1 (MQ=255) tGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCggg < 1:60282/142‑1 (MQ=255) tGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCggg > 2:60282/1‑142 (MQ=255) gCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATg < 2:1767266/150‑1 (MQ=255) cAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGc < 1:1292387/150‑1 (MQ=255) ggctggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATaa < 1:1296712/150‑1 (MQ=255) gctggcGTAGAGACTATAGGTCAGGGCTGTGGTTTCTCGGTCGCCGCTGGGGGCAACGTAGCTGGCGACGGGGACGGTGCTGGAGAGAATTGCCTTGATCAGCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAac < 1:643314/150‑1 (MQ=255) gctggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAac > 1:1667360/1‑150 (MQ=255) ctggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAacc < 1:217339/150‑1 (MQ=255) tggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCa < 2:1222342/113‑1 (MQ=255) tggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCa > 1:1222342/1‑113 (MQ=255) tggcGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAacca > 1:696454/1‑150 (MQ=255) tAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGt > 2:1921465/1‑150 (MQ=255) tAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGt > 1:707038/1‑150 (MQ=255) tataGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAg > 1:495862/1‑109 (MQ=255) ataGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGgcg < 1:1838832/93‑1 (MQ=255) ataGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGgcg > 2:1838832/1‑93 (MQ=255) aGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGGAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCtt > 1:788924/1‑150 (MQ=255) aGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCtt < 2:1102862/150‑1 (MQ=255) aGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCtt > 2:668368/1‑150 (MQ=255) gTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgc > 1:2424166/1‑150 (MQ=255) tGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATCGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgcg > 2:1148625/1‑150 (MQ=255) ggCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctg > 1:945233/1‑150 (MQ=255) cccagcggcgCCCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgg > 1:1135336/5‑148 (MQ=255) cccagcggcgCCCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgg < 2:1135336/144‑1 (MQ=255) cTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgggcc < 2:1571319/150‑1 (MQ=255) cagcggcgCCCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgg < 2:422839/144‑1 (MQ=255) cagcggcgCCCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgg > 1:422839/3‑146 (MQ=255) cgcgGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCACCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGa < 2:1818439/150‑1 (MQ=255) | TTCATCGTCGCCGCCTTTGGCTTTATCGTCACTGGGCGTGCCAGGCGCGCCGCCGATCCGCACCGGCGTGGCGGCGCCCAGGTTGGTCCCGGGCGCCATCGCTGCAATATGGCTGGCGTAGAGAATATAGGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGA > NC_002947/250762‑251057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |