Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,034,659 C→T 5.7% P191P (CCG→CCA)  PP_2647 ← MFS transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,034,6590CT 5.7% 256.3 / 4.4 87P191P (CCG→CCA) PP_2647MFS transporter
Reads supporting (aligned to +/- strand):  ref base C (45/37);  new base T (3/2);  total (48/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.69e-01

TACGCAGCAAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCGT  >  NC_002947/3034510‑3034804
                                                                                                                                                     |                                                                                                                                                 
tACGCAGCAAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCAcc                                                                                                                                                   <  2:1596201/150‑1 (MQ=255)
     agcaAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTAc                                                                                                                                              >  2:1117908/1‑150 (MQ=255)
     agcaAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTAc                                                                                                                                              >  1:1824255/1‑150 (MQ=255)
       caAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGc                                                                                                                                            <  1:2362785/150‑1 (MQ=255)
        aaaGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGATCAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGcc                                                                                                                                           >  2:961797/1‑150 (MQ=255)
             gcgcCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACca                                                                                                                                      <  1:1491485/150‑1 (MQ=255)
              cgcCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcag                                                                                                                                     <  2:638410/150‑1 (MQ=255)
               gcCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagt                                                                                                                                    <  2:722091/150‑1 (MQ=255)
               gcCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagt                                                                                                                                    <  2:669040/150‑1 (MQ=255)
                  aGGCCGATCAGCAACACGGCGATCAACCCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATTCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgca                                                                                                                                 <  1:1343369/150‑1 (MQ=255)
                  aGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgca                                                                                                                                 <  2:1198745/150‑1 (MQ=255)
                  aGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgca                                                                                                                                 <  1:649895/150‑1 (MQ=255)
                    gCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgcagt                                                                                                                               >  2:1921687/1‑150 (MQ=255)
                       gATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGAc                                                                                                                            >  2:1640536/1‑150 (MQ=255)
                        aTCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcag                                                                                                                                     <  2:1179943/140‑1 (MQ=255)
                        aTCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcag                                                                                                                                     >  1:1179943/1‑140 (MQ=255)
                         tCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCa                                                                                                                          <  2:1587467/150‑1 (MQ=255)
                         ccAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCa                                                                                                                          <  2:2312136/149‑1 (MQ=255)
                           aGCACCACGGCCATCAAACCGACCCGTGCTTGCGGGTTGATGGACGCCGCTGGGAGGTCGCGGATGCGGGGGGCTTTTTCCGGCAGCGGCCGGGGCAGCAGGATCACCTGTGCCAGCAGTACCGGTACGCTTACCAGTGCAGTGACCAgg                                                                                                                        <  2:1572401/150‑1 (MQ=255)
                              aaCACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAAc                                                                                                                     <  2:1573905/150‑1 (MQ=255)
                               acacGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACg                                                                                                                    >  2:1209163/1‑150 (MQ=255)
                                 acGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTc                                                                                                                  <  2:1655206/150‑1 (MQ=255)
                                   ggCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgca                                                                                                                                 >  1:138226/1‑133 (MQ=255)
                                   ggCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgca                                                                                                                                 <  2:138226/133‑1 (MQ=255)
                                     cGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgc                                                                                                              <  2:1251951/150‑1 (MQ=255)
                                      gATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgcg                                                                                                             >  2:1082312/1‑150 (MQ=255)
                                      gATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgcg                                                                                                             >  1:1186554/1‑150 (MQ=255)
                                      gATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgcg                                                                                                             >  2:275304/1‑150 (MQ=255)
                                          aaaCCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAg                                                                                                         >  1:1712335/1‑150 (MQ=255)
                                                ccccGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATc                                                                                                   <  2:2286840/149‑1 (MQ=255)
                                                   cGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAgg                                                                                                >  2:2071681/1‑150 (MQ=255)
                                                          gCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCa                                                                                         >  1:1626661/1‑150 (MQ=255)
                                                          gCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCACCAGCCCCGGTCTGGCTGGGAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCa                                                                                         >  1:145467/1‑150 (MQ=255)
                                                            gggTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGc                                                                                       <  1:1117908/150‑1 (MQ=255)
                                                             ggTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGcc                                                                                      >  1:1717507/1‑150 (MQ=255)
                                                              gTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCa                                                                                                                          <  2:714070/113‑1 (MQ=255)
                                                              gTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCa                                                                                                                          >  1:714070/1‑113 (MQ=255)
                                                              gTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTCCAGTGACCAGGAATGTCATGCGCCAGCCCATCAGGCCACTCAGCCa                                                                                     >  1:1322077/1‑150 (MQ=255)
                                                                  atgaACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTg                                                                                 >  1:972407/1‑150 (MQ=255)
                                                                     aacaacGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCg                                                                              >  1:1587346/1‑150 (MQ=255)
                                                                       caacGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGAc                                                                            >  1:673737/1‑150 (MQ=255)
                                                                        aacGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACa                                                                           <  2:1210716/150‑1 (MQ=255)
                                                                           gCTGGCAGGTCGCGGATGCGGCTGGCCAATTCCCGCGTCAACGTTGTCAGGAGGGACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGc                                                                        <  2:261116/150‑1 (MQ=255)
                                                                           gCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGa                                                                                                                             >  1:2280407/1‑97 (MQ=255)
                                                                           gCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGa                                                                                                                             <  2:2280407/97‑1 (MQ=255)
                                                                             tGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgcag                                                                                                                                <  1:2083484/92‑1 (MQ=255)
                                                                             tGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACcagtgcag                                                                                                                                >  2:2083484/1‑92 (MQ=255)
                                                                                   gTCGCGGAGGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCAc                                                                <  2:314963/150‑1 (MQ=255)
                                                                                    tCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgc                                                                                                              >  1:1049732/1‑103 (MQ=255)
                                                                                    tCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATgc                                                                                                              <  2:1049732/103‑1 (MQ=255)
                                                                                          atgcggatgGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTc                                                         <  1:1209163/150‑1 (MQ=255)
                                                                                               gatgGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAg                                                    >  2:2136890/1‑150 (MQ=255)
                                                                                                atgGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAgg                                                   >  1:588099/1‑150 (MQ=255)
                                                                                                  ggCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGt                                                 >  2:2109859/1‑150 (MQ=255)
                                                                                                   gCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTGCCGTCGCCAGGGtt                                                >  1:1075596/1‑150 (MQ=255)
                                                                                                    ccTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGCCCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTa                                               >  2:1123332/1‑150 (MQ=255)
                                                                                                    ccTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAg                                                                                                 <  1:1659314/100‑1 (MQ=255)
                                                                                                    ccTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAg                                                                                                 >  2:1659314/1‑100 (MQ=255)
                                                                                                     cTTTTCCGGCATCAGCCGCGGGAGTAGGAACACCTGTGCCAGCAGCGCCGGTACGCCTACCAGCGCAGTGACCAGGAACGTCATGAGCACGCCAATCAGGACACTCAGCAAGGTGCCGGGGTGCACGCCCGGGTCCGTCGCCAGGGTTAc                                              <  2:1207771/150‑1 (MQ=255)
                                                                                                     cTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTAc                                              <  2:1186554/150‑1 (MQ=255)
                                                                                                     cTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTAc                                              >  1:1012872/1‑150 (MQ=255)
                                                                                                     cTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTAc                                              >  1:475305/1‑150 (MQ=255)
                                                                                                           cGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCAATCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTAcgcccgc                                        >  1:744478/1‑150 (MQ=255)
                                                                                                              cATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCat                                     <  1:961797/150‑1 (MQ=255)
                                                                                                                    ccGCGGCAGCAGGAACACCCGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCatgatgat                               <  1:1965191/150‑1 (MQ=255)
                                                                                                                     cgcgGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCatgatgatg                              <  1:1640536/150‑1 (MQ=255)
                                                                                                                       cgGCAGCAGGCACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACACCCGCCATGATGATGGa                            <  1:587997/150‑1 (MQ=255)
                                                                                                                         gcagcaGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGt                          <  2:1824255/150‑1 (MQ=255)
                                                                                                                           agcagGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttg                        >  2:1087802/1‑150 (MQ=255)
                                                                                                                            gcagGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAg                                                    <  1:771937/121‑1 (MQ=255)
                                                                                                                            gcagGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAg                                                    >  2:771937/1‑121 (MQ=255)
                                                                                                                                gAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggcttt                   >  1:194890/1‑150 (MQ=255)
                                                                                                                                gAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggcttt                   >  1:247168/1‑150 (MQ=255)
                                                                                                                                      cTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGcc                                                                               >  2:1425000/1‑84 (MQ=255)
                                                                                                                                      cTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGcc                                                                               <  1:1425000/84‑1 (MQ=255)
                                                                                                                                      cTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTAc             >  1:2038647/1‑150 (MQ=255)
                                                                                                                                      cTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTCTGGCTAc             <  1:1082312/150‑1 (MQ=255)
                                                                                                                                      cTGTGCCAGCAGCACCGGTACGCCTACCAGAGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATTATGATGGAGTTGGCTTTGCCTAc             >  2:8656/1‑150 (MQ=255)
                                                                                                                                        gtgCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGc           >  2:946719/1‑150 (MQ=255)
                                                                                                                                           ccAGCAGCACCGGTACGCCTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCa        >  2:1190622/1‑150 (MQ=255)
                                                                                                                                                tgcaCTGGTAGGCGTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggctttggc                >  2:275612/2‑137 (MQ=255)
                                                                                                                                                tgcaCTGGTAGGCGTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggctttggc                <  1:275612/136‑1 (MQ=255)
                                                                                                                                                tgcaCTGGTAGGCGTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCg   >  2:1439588/2‑150 (MQ=255)
                                                                                                                                                 gcaNCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCGt  >  2:1501262/1‑150 (MQ=255)
                                                                                                                                                 gcaCTGGTAGGCGTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggctttgg                 <  1:1867535/135‑1 (MQ=255)
                                                                                                                                                 gcaCTGGTAGGCGTACCGGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGttggctttgg                 >  2:1867535/1‑135 (MQ=255)
                                                                                                                                                 gcaCCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCGt  >  1:262691/1‑150 (MQ=255)
                                                                                                                                                 gcaCCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCGt  >  2:1004865/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
TACGCAGCAAAGTGCGCCAGGCCGATCAGCAACACGGCGATCAAACCGACCCGTGCTTGCGGGTTGATGAACAACGCTGGCAGGTCGCGGATGCGGATGGCCTTTTCCGGCATCAGCCGCGGCAGCAGGAACACCTGTGCCAGCAGCACCGGTACGCCTACCAGTGCAGTGACCAGGAACGTCATGCGCCAGCCCATCAGGCCACTCAGCCAGGTGCCGACAGGCACGCCCACTACCGTCGCCAGGGTTACGCCCGCCATGATGATGGAGTTGGCTTTGGCTACGCCCATTCCGT  >  NC_002947/3034510‑3034804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑