| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,041,429 | G→A | 6.5% | S202S (AGC→AGT) | PP_2653 ← | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,041,429 | 0 | G | A | 6.5% | 276.7 / 4.6 | 96 | S202S (AGC→AGT) | PP_2653 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (50/38); new base A (4/3); total (54/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGGTGTTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCTGCA > NC_002947/3041289‑3041577 | aGGTGTTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGAGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCggg > 2:1997392/1‑150 (MQ=255) tgtTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGcc > 2:1650538/1‑150 (MQ=255) gtTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCg > 1:1697364/1‑150 (MQ=255) gtTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTGCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCg > 2:1891773/1‑150 (MQ=255) ttCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCgg < 2:2232735/150‑1 (MQ=255) gATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCaa > 1:1568554/1‑150 (MQ=255) tGCGCAGTGACTGCACGGTGACATCCTGCGGCCTGGCCCAGGTGGTCATGTATCTGTTTATGCGCAGCTCACCATCCGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGt < 1:1742031/150‑1 (MQ=255) gcAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGGGCCGGCAAGTcgc > 1:1391578/1‑150 (MQ=255) aGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTc > 1:15424/1‑146 (MQ=255) aGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTc < 2:15424/146‑1 (MQ=255) aCTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAgc < 1:573268/150‑1 (MQ=255) cTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGT‑AGCTCGCCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAgcg > 1:723613/1‑150 (MQ=255) tGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGAGCAAgcgc > 2:1308588/1‑150 (MQ=255) tGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCa > 1:1679762/1‑150 (MQ=255) aTCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑TGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGc > 1:1106998/1‑150 (MQ=255) aTCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGc > 2:331753/1‑150 (MQ=255) tCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGcc < 1:1650538/150‑1 (MQ=255) tCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGcc > 2:428284/1‑150 (MQ=255) tCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGcc > 1:656365/1‑150 (MQ=255) cTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCgg > 2:238605/1‑150 (MQ=255) tGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGa > 1:419001/1‑150 (MQ=255) tGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGa < 2:1679762/150‑1 (MQ=255) gCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGAt > 1:241820/1‑150 (MQ=255) gCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGc < 1:238605/150‑1 (MQ=255) aTGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGAGCTCACGAGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCt > 2:516235/1‑150 (MQ=255) aaaGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGc > 2:1922517/1‑150 (MQ=255) gtgAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTg < 2:1602626/150‑1 (MQ=255) gAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGa < 1:2021537/150‑1 (MQ=255) aaCGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTg < 1:2063499/88‑1 (MQ=255) aaCGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTg > 2:2063499/1‑88 (MQ=255) aaCGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAg < 1:1094341/150‑1 (MQ=255) gACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGt > 1:163644/1‑150 (MQ=255) gACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGt > 2:2179018/1‑150 (MQ=255) gACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGt > 1:206670/1‑150 (MQ=255) aCAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGtt < 1:691818/150‑1 (MQ=255) aCAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGGCGGGGACGGCAAGTCGCGCAAGCGCGCTGCAAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGtt > 1:42040/1‑150 (MQ=255) aGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTTGAGGCACGTTGc < 1:359793/150‑1 (MQ=255) gAACCGCAGCTCACCGTACGGGGTGTATACGCGGATCAGGCAATCAACGTGTGCCAG‑CGGCGTCT‑GGCTCGTTCTTGCCGGGGCCGGCAAGTCGCGCCAGCGCGCTGCCAGTGCCGGATTGACTGCGGCTTCCCTGGATGCACGtttcta < 2:523184/150‑5 (MQ=255) ccGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGgc > 1:1850454/1‑150 (MQ=255) cGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCCAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGgca > 1:227466/1‑150 (MQ=255) gCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGgcag > 2:1635191/1‑150 (MQ=255) cACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAgcgc > 2:2124682/1‑150 (MQ=255) cACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAgcgc < 2:2121837/150‑1 (MQ=255) aCCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGcgcg > 1:797087/1‑150 (MQ=255) ccATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTc > 2:2092717/1‑80 (MQ=255) ccATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTc < 1:2092717/80‑1 (MQ=255) cATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGa > 1:598144/1‑150 (MQ=255) cATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGa < 2:163644/150‑1 (MQ=255) cATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGa < 2:656365/150‑1 (MQ=255) gggTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAgcgcgc > 2:27807/1‑85 (MQ=255) gggTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAgcgcgc < 1:27807/85‑1 (MQ=255) gggTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCg < 2:1391578/150‑1 (MQ=255) tgtTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAAGCAGCAGCGCGGATTTACGgcg > 1:204148/1‑150 (MQ=255) gtTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGgcgc < 1:1635191/150‑1 (MQ=255) ttCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGCCCCGGCAAgcc > 2:2019933/1‑66 (MQ=37) ttCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGCCCCGGCAAgcc < 1:2019933/68‑3 (MQ=37) ttCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGCCCCGGCAAgcc > 2:2020382/1‑66 (MQ=37) ttCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGACTTGCCGGCCCCGGCAAgcc < 1:2020382/68‑3 (MQ=37) tCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGt > 2:268303/1‑150 (MQ=255) aCGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTg > 2:1545496/1‑150 (MQ=255) aCGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTg < 1:1997392/150‑1 (MQ=255) gggTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCa < 2:598144/150‑1 (MQ=255) gTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAgg < 1:428284/150‑1 (MQ=255) tCA‑GCAGCAGAGGCGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGCGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGt < 2:723613/150‑1 (MQ=255) a‑gcagcagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGa < 2:563114/150‑1 (MQ=255) a‑gcagcagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTACCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGTCTGCGGCCTCCCTGGAGGGGCGTTGCCAGGCCGCAGCGCGGATTTCCGGCGCGTTGGCCCGGTGa > 1:28125/1‑150 (MQ=255) gcagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTgg < 2:519441/96‑1 (MQ=255) gcagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTgg > 1:519441/1‑96 (MQ=255) cagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCAc > 1:74829/1‑101 (MQ=255) cagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCAc < 2:74829/101‑1 (MQ=255) cagAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCAcc > 2:1691926/1‑150 (MQ=255) agagGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTTTCGGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCAccc < 2:567499/150‑1 (MQ=255) gagGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCa < 2:1697364/150‑1 (MQ=255) gagGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCa < 2:241820/150‑1 (MQ=255) ggggTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGa < 1:2124682/150‑1 (MQ=255) gggTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGc > 2:697538/1‑82 (MQ=255) gggTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGc < 1:697538/82‑1 (MQ=255) gTGGCTGTCGTCATCT‑GGCACGGGCTTGGGGTGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGAGTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGacca > 1:1639198/1‑150 (MQ=255) ggCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGaccacc > 1:2160423/1‑150 (MQ=255) gCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCt < 2:1387423/83‑1 (MQ=255) gCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCt > 1:1387423/1‑83 (MQ=255) cTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCgg < 2:1568554/150‑1 (MQ=255) tGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGa > 1:1132553/1‑110 (MQ=255) tGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGa < 2:1132553/110‑1 (MQ=255) tcgtcATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCAACCAGACCACCGGGGc > 1:137261/1‑150 (MQ=255) gtcATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGAt < 2:2045354/130‑1 (MQ=255) gtcATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGAt > 1:2045354/1‑130 (MQ=255) tCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGCTTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCAcagca > 1:514611/1‑150 (MQ=255) cT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTAGCCAGGCAGCAGCTCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCAcagcag > 2:1300938/1‑150 (MQ=255) t‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAgt < 1:1891773/150‑1 (MQ=255) t‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAgt < 1:1922517/150‑1 (MQ=255) t‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAgt > 1:577304/1‑150 (MQ=255) t‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAgt > 2:1933742/1‑150 (MQ=255) t‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAgt > 2:1935984/1‑150 (MQ=255) aCGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCt < 1:2179018/150‑1 (MQ=255) aCGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCt > 1:899732/1‑150 (MQ=255) ggCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCTgca < 1:268303/150‑1 (MQ=255) ggCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCTgca < 1:2076125/150‑1 (MQ=255) | AGGTGTTCGATGCGCAGTGACTGCACGGTGACATCCTGCGGCATGCCAAAGGTGGTGAACGTGGACAGGAACCGCAGCTCACCATACGGGGTGTTCACGCGGGTCA‑GCAGCAGAGGGGTGGCTGTCGTCATCT‑GGCACGGGCTTGCCGGGGCCGGCAAGTCGCGCAAGCGCGCTGCCAGTGCCGGATTGCCTGCGGCCTCCCTGGAGGCACGTTGCCAGGCAGCAGCGCGGATTTCCGGCGCGTTGGCCAGGTGATCACCCAGACCACCGGGGCACAGCAGTGTCTGCA > NC_002947/3041289‑3041577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |