| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,146,654 | T→C | 8.3% | intergenic (+47/+19) | PP_2761 → / ← sfnA | ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,146,654 | 0 | T | C | 8.3% | 266.7 / 10.2 | 96 | intergenic (+47/+19) | PP_2761/sfnA | ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein |
| Reads supporting (aligned to +/- strand): ref base T (49/39); new base C (4/4); total (53/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01 | |||||||||||
TGATCGGCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACGGGCGTTGCGCC > NC_002947/3146507‑3146803 | tgATCGGCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTAt > 1:1460920/1‑150 (MQ=255)tgATCGGCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTAt > 2:793656/1‑150 (MQ=255) tCGGCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGcc < 1:128895/150‑1 (MQ=255) gCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGTGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCa < 2:2388885/150‑1 (MQ=255) gCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCa < 2:2146285/150‑1 (MQ=255) gCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCa > 1:1714400/1‑150 (MQ=255) tGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAgg > 1:1386831/1‑150 (MQ=255) tGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAgg > 2:2448493/1‑150 (MQ=255) ggAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGc < 1:334065/150‑1 (MQ=255) gAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAATCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGcc > 2:1371614/1‑150 (MQ=255) aaTTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCa < 1:2219396/150‑1 (MQ=255) aTTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc < 2:1788552/150‑3 (MQ=255) tcttctGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCt > 1:2159763/1‑150 (MQ=255) cttctGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCAt < 2:1148627/146‑1 (MQ=255) cttctGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCAt > 1:1148627/1‑146 (MQ=255) ttctGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCttt > 1:1580448/1‑150 (MQ=255) tGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAg < 2:1016771/150‑1 (MQ=255) tGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc < 1:2073508/142‑3 (MQ=255) tGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCGGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc > 2:2073508/1‑140 (MQ=255) gcagcaGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCa > 1:1299128/1‑147 (MQ=255) gcagcaGGTGCCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTCTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCa < 2:1299128/147‑1 (MQ=255) cagcagGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc < 1:916686/139‑3 (MQ=255) cagcagGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc > 2:915996/1‑137 (MQ=255) cagcagGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc > 2:916686/1‑137 (MQ=255) cagcagGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGCATACCCCAGGcctc < 1:915996/139‑3 (MQ=255) agGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCt < 1:793656/150‑1 (MQ=255) ggTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCtt < 1:879594/150‑1 (MQ=255) cACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCAcc > 1:287909/1‑150 (MQ=255) cACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCAcc < 1:105420/150‑1 (MQ=255) aCCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCg > 2:341708/1‑150 (MQ=255) gCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCAc < 2:2438590/150‑1 (MQ=255) ttCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAg < 1:528466/128‑1 (MQ=255) ttCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAg > 2:528466/1‑128 (MQ=255) tCTGATTCTCTCTGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGTCGAGGCCTGGTGTTTGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGAt < 1:364293/150‑1 (MQ=255) tCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGAt > 1:250835/1‑150 (MQ=255) gATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTg > 2:711499/1‑150 (MQ=255) aTTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGc > 1:2337482/1‑150 (MQ=255) tcGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCcataca > 2:1900696/1‑150 (MQ=255) tcGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCcataca > 1:2428109/1‑150 (MQ=255) ggTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCcatacata < 1:1887579/150‑1 (MQ=255) ttCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAgg > 1:639477/1‑150 (MQ=255) tCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCACGCTTTCGGGACTGCTTGGCACCGCCACCGATCTGCCATACATAggg < 2:962424/150‑1 (MQ=255) ctgctgTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGggc < 2:351305/150‑1 (MQ=255) tgctgTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGggcg > 1:1712171/1‑150 (MQ=255) tgTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAggg < 1:2095143/145‑1 (MQ=255) tgTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAggg > 2:2095143/1‑145 (MQ=255) ttCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAAGGCCAGTGTAAAGCAACAATTCC‑‑CTGTGTGCCCCAGGCCATGCATTCAGGACTGCTTGGCACCGCCAACGATCTGGCATACAGAGGGCGGCTCg > 2:1263141/1‑150 (MQ=255) cAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑GGTGACGAGGTCTGGGTTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCt < 2:2415398/150‑1 (MQ=255) aGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTg > 1:1978315/1‑150 (MQ=255) tttGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCtt > 1:1950645/1‑107 (MQ=255) tttGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCtt < 2:1950645/107‑1 (MQ=255) tttGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCtt > 1:730446/1‑107 (MQ=255) tttGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCtt < 2:730446/107‑1 (MQ=255) tttGCCAGCCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGAGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCa < 2:1311147/150‑1 (MQ=255) tGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCAtt < 2:1460920/150‑1 (MQ=255) cccgacGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGa < 1:2342103/145‑1 (MQ=255) gTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGt > 2:142480/1‑150 (MQ=255) gCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCa > 2:879332/1‑150 (MQ=255) gACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGGTCTGAGGACTGCTTGGCACCGCCACCGATCTGCCATACCTAGGGCGGCTCGCTGCCATTGACGTGCCAGt > 1:1732943/1‑150 (MQ=255) aCTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGGCGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAg < 1:496913/85‑1 (MQ=255) aCTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGGCGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAg > 2:496913/1‑85 (MQ=255) ggCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCg > 1:71475/1‑150 (MQ=255) gcTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCgatg > 2:1456161/1‑150 (MQ=255) acgacacTGGCGTTCCGCCCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCg > 2:1651722/7‑150 (MQ=255) ttCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTc > 2:1489654/1‑113 (MQ=255) ttCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTc < 1:1489654/113‑1 (MQ=255) ttCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTcc > 1:249772/1‑150 (MQ=255) acTGGCGTTCCGCCCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCt > 2:859315/2‑150 (MQ=255) cTGGCGTTCCGCCCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCtt < 1:859315/150‑1 (MQ=255) tGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTg < 2:2337482/150‑1 (MQ=255) ggCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCTGATGATGCGTTCCTTGt < 1:1900696/150‑1 (MQ=255) ggCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGt < 1:879332/150‑1 (MQ=255) ggCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGt < 1:548843/150‑1 (MQ=255) gCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGAt > 2:1574727/1‑87 (MQ=255) gCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGAt < 1:1574727/87‑1 (MQ=255) gCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTa < 2:1580448/150‑1 (MQ=255) gCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTa < 2:1714400/150‑1 (MQ=255) gTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGa < 1:1692196/117‑1 (MQ=255) gTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGa > 2:1692196/1‑117 (MQ=255) ggCGGAACGCCAGTGT‑‑CGCGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCg > 2:429402/1‑150 (MQ=255) gCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCgg < 2:1812684/150‑1 (MQ=255) aaCGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTATATCACCGGGTtg > 2:1318894/1‑150 (MQ=255) gCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGc > 2:1786532/1‑150 (MQ=255) ccAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCTAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTtg > 1:675406/1‑146 (MQ=255) ccAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCTAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTtg < 2:675406/146‑1 (MQ=255) t‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGt < 1:1712789/126‑1 (MQ=255) t‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGt > 2:1712789/1‑126 (MQ=255) t‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAggcgg < 1:1786532/150‑1 (MQ=255) t‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAggcgg > 1:639707/1‑150 (MQ=255) t‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAggcgg > 2:424429/1‑150 (MQ=255) gAGGCCTGGGGTCTGCCCCGGGGCAGGCTGTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACg > 2:1970984/1‑150 (MQ=255) gAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACg > 1:1446066/1‑150 (MQ=255) gAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACg > 1:947946/1‑150 (MQ=255) atggCCTGGGGCATACCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACg > 1:1888003/3‑150 (MQ=255) gCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCAGTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACGGGc > 2:1296048/1‑150 (MQ=255) tGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACGGGCGtt > 2:303414/1‑150 (MQ=255) tATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGCTGCGTTCATTCGGTACCACCGGGGTGTGCGGGGCGGCAGTACGGGCGTTGCGcc > 1:533349/1‑150 (MQ=255) tATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACGGGCGTTGCGcc > 1:1856340/1‑150 (MQ=255) | TGATCGGCTGGAATTTCTTCTGGCAGCAGGTGGCCACCGGCGTTCTGATTCTCTCGGTTCTGCTGTTCAGTTTTGCCAGTCGGCGACTCGGCGCTGGATAGTTCTGGCGTTCCGGGCGGAACGCCAGTGT‑‑CGTGACGAGGCCTGGGGTATGCCCCAGGCCATGCTTTCAGGACTGCTTGGCACCGCCACCGATCTGCCATACATAGGGCGGCTCGCTGCCATTGACGTGCCAGTCGCCGATGATGCGTTCCTTGTAGATCACCGGGTTGTGCGAGGCGGCAGTACGGGCGTTGCGCC > NC_002947/3146507‑3146803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |