Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,162,068 | T→C | 5.6% | L299P (CTG→CCG) | PP_2776 → | homocysteine S‑methyltransferase family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,162,068 | 0 | T | C | 5.6% | 268.7 / 3.8 | 89 | L299P (CTG→CCG) | PP_2776 | homocysteine S‑methyltransferase family protein |
Reads supporting (aligned to +/- strand): ref base T (42/42); new base C (2/3); total (44/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.48e-01 |
AACGATACGCTGCTCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAGCGAAGTGCGC > NC_002947/3161923‑3162217 | aaCGATACGCTGCTCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATctgcaa < 2:2077791/150‑1 (MQ=255) aTACGCTGCTCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATctgcaagcct < 2:1642610/150‑1 (MQ=255) ctgctCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGCGCCCCTCCCCCCCCTCGACGCGCCTctgcacccctgcaag > 2:1853620/1‑150 (MQ=255) ctCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAg < 2:2022510/150‑1 (MQ=255) tCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgg > 1:629193/1‑150 (MQ=255) gATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgggg > 2:2026406/1‑150 (MQ=255) tatTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGAt > 2:185117/1‑150 (MQ=255) atTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATg < 1:185117/150‑1 (MQ=255) tcttGCCGACCTGGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGa < 2:602738/147‑1 (MQ=255) gCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATaa > 2:1229994/1‑150 (MQ=255) ggCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACaga < 1:1874953/150‑1 (MQ=255) ggCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACaga < 1:79305/150‑1 (MQ=255) gCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgg < 1:651710/128‑1 (MQ=255) gCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgg > 2:651710/1‑128 (MQ=255) cccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAgagg > 1:1402173/1‑150 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAATGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAgagga > 1:1496267/1‑150 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATaa < 1:1461337/137‑1 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATaa > 2:1461337/1‑137 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAAc > 1:1478908/1‑144 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAAc < 2:1478908/144‑1 (MQ=255) ccGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAgagga > 2:167574/1‑150 (MQ=255) actgtaacTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGcc > 2:803648/8‑150 (MQ=255) gTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCcgcg > 2:2386803/1‑150 (MQ=255) tGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAACCAGAGGAGGCCGCGCTTgg < 2:2436325/150‑1 (MQ=255) tGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTgg > 2:1471543/1‑150 (MQ=255) gCAGTGGGCGCAGCAGTGGGTCGAGGCCGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTNGGc < 2:1496267/150‑1 (MQ=255) gggCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAgg < 1:2026406/150‑1 (MQ=255) agcagTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGttt > 2:289987/1‑150 (MQ=255) gggTCGAGGAAGTGGCTGACATTGGGGGCGGCTGCGGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGATGAGGCCGCGCTTGGCTAATTCTGTTTCTggcg < 2:2333701/150‑1 (MQ=255) ggTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTggcgg > 1:1089194/1‑150 (MQ=255) gTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAGGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTggcggc > 1:160342/1‑150 (MQ=255) tCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCt > 2:1354262/1‑150 (MQ=255) tCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCt > 1:1508450/1‑150 (MQ=255) gAGGAAGGGGCTGACATTGTGGGCGCGCACTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTgg > 1:1244827/1‑150 (MQ=255) aGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGa > 2:1999441/1‑150 (MQ=255) ggAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAg < 1:925344/150‑1 (MQ=255) gAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGc > 2:186644/1‑150 (MQ=255) aGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCgg < 2:505334/150‑1 (MQ=255) ggggCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCggg < 2:374477/150‑1 (MQ=255) ggggCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCggg < 1:2318208/150‑1 (MQ=255) ggCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCg > 2:1260409/1‑150 (MQ=255) cTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAGGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGtt < 2:160342/150‑1 (MQ=255) cTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGNGtt < 2:1508450/150‑1 (MQ=255) tGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGCAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTg > 1:659242/1‑150 (MQ=255) cATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGt < 1:1443029/150‑1 (MQ=255) aTTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTg > 2:696468/1‑150 (MQ=255) aTTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTg > 2:1068055/1‑150 (MQ=255) tgtgGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAg < 1:116471/150‑1 (MQ=255) tgGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCgcgc < 1:1782264/104‑1 (MQ=255) tgGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCgcgc > 2:1782264/1‑104 (MQ=255) ggcTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCg < 1:803648/150‑1 (MQ=255) ggcTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCg < 1:1999441/150‑1 (MQ=255) ctgctgCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGgt < 1:186644/150‑1 (MQ=255) ctgctgCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGgt < 1:1229994/150‑1 (MQ=255) gctgcGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGgtgt < 1:2427343/150‑1 (MQ=255) gctgcGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGgtgt < 2:2338298/150‑1 (MQ=255) tgcGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGa < 1:1532787/150‑1 (MQ=255) tgcGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGAAGGGGATGCAATAATCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGa < 1:2386803/150‑1 (MQ=255) aTCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACa > 1:1450455/1‑150 (MQ=255) tCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgg > 2:629716/1‑54 (MQ=255) tCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAgg < 1:629716/54‑1 (MQ=255) tCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAg > 2:2447134/1‑150 (MQ=255) ggCCCGGAGCACATCGCCCGACTTGACGAGCATCCGCAAGCCTGCAACCTGCGTATGTAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGcc < 2:1244827/150‑1 (MQ=255) gCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCcg > 2:1527482/1‑150 (MQ=255) gCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCcg > 2:2316339/1‑150 (MQ=255) ccGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCcgcg > 1:978662/1‑150 (MQ=255) aGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGTTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCgg < 1:1022821/150‑1 (MQ=255) gCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCggg > 1:1564496/1‑150 (MQ=255) caTCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCAAAATCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGa < 1:167574/150‑1 (MQ=255) aTCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAg > 1:914376/1‑150 (MQ=255) tCGCCCGACTTGACGAGCATCCGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGcc > 2:1588066/1‑137 (MQ=255) tCGCCCGACTTGACGAGCATCCGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGcc > 2:386055/1‑137 (MQ=255) tCGCCCGACTTGACGAGCATCCGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGcc < 1:1588066/137‑1 (MQ=255) tCGCCCGACTTGACGAGCATCCGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGcc < 1:386055/137‑1 (MQ=255) cccGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTCGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAg > 2:1686103/1‑150 (MQ=255) ccGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGa > 2:1381557/1‑150 (MQ=255) ccGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGa > 1:1538881/1‑150 (MQ=255) ccGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGCCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGa < 1:872223/150‑1 (MQ=255) gACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGtt < 2:1459820/102‑1 (MQ=255) gACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGtt > 1:1459820/1‑102 (MQ=255) gACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGGTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACg > 2:295543/1‑150 (MQ=255) gttGGCGAGCATTTGGAAGGCTGGAAGCAGGGTATGGTATAAGCGAAACAGAGGAGGCCGCGGCTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACggg < 1:1853620/149‑1 (MQ=255) ttGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGc > 2:1536125/1‑150 (MQ=255) tGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACTGGCa < 1:1319552/150‑1 (MQ=255) tGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCa < 1:1260409/150‑1 (MQ=255) tGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCa < 1:289987/150‑1 (MQ=255) gACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAg < 2:1450455/150‑1 (MQ=255) gACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAg < 1:1381557/150‑1 (MQ=255) aCGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTCATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAGc < 2:457123/150‑1 (MQ=255) cATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGttt < 1:932191/70‑1 (MQ=255) cATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGttt > 2:932191/1‑70 (MQ=255) aTCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCAGGCGTTGCCTCACCTTGCCTGTCGAATCGACAGCCGCGTCGGGTGAGGCAGAGGGGCAGCGACGTg > 2:392399/1‑150 (MQ=255) tgcaagcctgcaagcAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAGCGAAGTgcgc < 2:1847053/150‑1 (MQ=255) tgcaagcctgcaagcAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAGCGAAGTgcgc > 2:2058842/1‑150 (MQ=255) | AACGATACGCTGCTCGATATTCGTGCCGACCTAGGGCCCGAGGCGTACCTGCAGTGGGCGCAGCAGTGGGTCGAGGAAGGGGCTGACATTGTGGGCGGCTGCTGCGGCATCGGCCCGGAGCACATCGCCCGACTTGACGAGCATCTGCAAGCCTGCAAGCAGGGGATGGAATAAGCGAAACAGAGGAGGCCGCGCTTGGCGAAGGCTGTTTCTGGCGGCTGGAGCGGGCGTTGCGTGAGCTTGGCGGTGTGATCGACAGCCGCGTCGGGTGAGGCAGACGGGCAGCGAAGTGCGC > NC_002947/3161923‑3162217 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |