New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5038212 =	NA (NA)	9 (0.260)	7/272	3.2	NA	coding (1256/1536 nt)	PP_4443	transposase
	?	NC_002947	5038234 =	NA (NA)					coding (1278/1536 nt)	PP_4443	transposase
Rejected: Coverage evenness skew score above cutoff.

GATGGGCACAGATCCATCGTCCAGGTAGCGCGTCAGCGCTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5038255‑5038212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCATGAGTT  >  NC_002947/5038234‑5038364                                                                                                                                                                                 GATGGGCACAGATCCATCGTCCAGGTAGCGCGTCAGCGCTACCCGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGT                           >  1:429597/1‑150             TCCATCGTCCAGGTAGCGCGTCAGCGCTACCCGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTT                                                    >  1:597039/1‑113             TCCATCGTCCAGGTAGCGCGTCAGCGCTACCCGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTT                                                    <  2:597039/113‑1                ATCGTCCAGGTAGCGCGTCAGCGCTACCCGGACGATGGGGCTGTGCCCATCGACAACAACCAGGTCGAGAACCAGATACGGCCCTGGGCACTCGG                                                                   >  1:42502/1‑95                ATCGTCCAGGTAGCGCGTCAGCGCTACCCGGACGATGGGGCTGTGCCCATCGACAACAACCAGGTCGAGAACCAGATACGGCCCTGGGCACTCGG                                                                   <  2:42502/95‑1                   GTCCAGGTAGCGCGTCAGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACAAGATACTGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATC         >  2:426508/1‑150                       AGGTAGCGCGTCAGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGG                                           >  1:252550/1‑112                       AGGTAGCGCGTCAGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGG                                           <  2:252550/112‑1                          TAGCGCGTCAGCGCTACCTGGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCCGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTCAACAACAGGATGAGATAATGAGTT  >  2:404294/1‑150                                                                                                                                                                                 GATGGGCACAGATCCATCGTCCAGGTAGCGCGTCAGCGCTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5038255‑5038212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGACGATGGATCTGTGCCCATCGACAACAATCAGGTCGAGAACCAGATACGGCCATGGGCACTCGGGCGCTCGAACTGGTTGTTTGCCGGGTCGCTGCGCAGTGGTAAACGAGCGGCTGCGATCATGAGTT  >  NC_002947/5038234‑5038364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.