Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4295982	4296022	41	3 [1]	[1] 2	PP_3765	H‑NS family protein MvaT

GTTGAAAAAGGATGCCGGCCTCAAACGCGAAATCGAATTCGAGCAGAAACTAGTCGGCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCGTCCAGCACACCCCCCAAGCA  >  NC_002947/4295834‑4295983                                                                                                                                                    |   gTTGAAAAAGGATGCCGGCCTCAAACGCGAAATCGAATTCGAGCAGAAACTAGTCGGCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCGTCCAGCACACCCCCCAAGca  >  1:296745/1‑150 (MQ=255)                                                         gCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCGTCCAGCACACCCCCCAAg    >  1:129295/1‑92 (MQ=255)                                                         gCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCGTCCAGCACACCCCCCAAg    <  2:129295/92‑1 (MQ=255)                                                                                                                                                    |   GTTGAAAAAGGATGCCGGCCTCAAACGCGAAATCGAATTCGAGCAGAAACTAGTCGGCCTGATGAAAAGCTATGACAAGAGCCTGCGCGATATCATCGCCATCCTCGACCCGAAGGCTGTGGCCCGCGCGTCCAGCACACCCCCCAAGCA  >  NC_002947/4295834‑4295983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑