| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4533623 | 32 (1.210) | 8 (0.330) | 7/250 | 1.9 | 22.2% | intergenic (+21/‑153) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| ? | NC_002947 | = 4533688 | 27 (1.120) | intergenic (+86/‑88) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase | |||||
ATTCTCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4533471‑4533623‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttgcctgtgTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACTGATGC < NC_002947/4533688‑4533606 ATTCTCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCT > 1:195601/1‑150ATTCTCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCT > 1:77079/1‑150 TCTCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGT < 1:73713/150‑1 CTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGTGGGCCTCTTCGCAG > 2:435441/1‑150 CAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGTGGGCCTCTTCGCAGGCGAACCCGCTCCTA > 1:277245/1‑150 CCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGC < 1:539881/150‑1 CCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGCGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCG > 2:579225/1‑150 CGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGCGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGA < 1:579225/150‑1 CGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGC < 1:435441/150‑1 CGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGTGGGCCTCTTCGCAGGCGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGC < 2:277245/150‑1 GGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTAGACTGTGAGGTCCCTTTCCCCCGCGAAGAGGCCCGCACAGGCAACACTGATGC < 2:110932/150‑1 ATTCTCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4533471‑4533623‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttgcctgtgTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACTGATGC < NC_002947/4533688‑4533606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |