New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 174906 | NA (NA) | 4 (0.100) | 4/244 | NT | NA | noncoding (1704/2902 nt) | PP_23SA | 23S ribosomal RNA |
? | NC_002947 | = 174936 | NA (NA) | noncoding (1734/2902 nt) | PP_23SA | 23S ribosomal RNA |
TGCTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174753‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 TGCTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGC > 1:1109184/1‑150 GCTTCCAAGAAAAGCTCCTAAGCTTCATATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGTCACCGTAACTTCGGGAGAAGGTGCGCC < 2:83929/150‑1 CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG < 1:1078006/150‑1 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGG > 1:655180/1‑150 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGG > 1:884033/1‑150 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGG > 2:216967/1‑150 TCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 2:493938/1‑150 GTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGC < 2:188182/121‑1 GTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGC > 1:188182/1‑121 ACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGG < 1:973818/111‑1 ACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGG > 2:973818/1‑111 ttcgaCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTA > 2:764896/6‑150 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTT < 1:341169/150‑1 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTT > 2:636897/1‑150 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 2:250198/150‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 2:880529/150‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTG > 2:1002051/1‑106 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTG < 1:1002051/106‑1 TGCTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174753‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |