New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 507013 = | 53 (1.220) | 4 (0.100) | 4/226 | NT | 7.8% | intergenic (+22/+111) | trpE/estP | anthranilate synthase component 1/esterase EstP |
? | NC_002947 | 507103 = | 48 (1.250) | intergenic (+112/+21) | trpE/estP | anthranilate synthase component 1/esterase EstP |
GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/507174‑507013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaatgggcCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG > NC_002947/507103‑507250 GATGAGTTGACGCAACAGGGTATTAGTTGAGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAC < 1:169/150‑1 GTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTAACCGCG > 1:1128263/1‑150 ACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGAAGCGGGTTTACCCGCGAATG > 1:449521/1‑150 GCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAAGACGATAATAAGATGGCCGCTGATGCCGGAGGCTGGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGG > 1:407298/1‑150 GCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGG > 1:815930/1‑150 TTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC > 1:1103678/1‑117 TTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC < 2:1103678/117‑1 GTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATC > 1:464304/1‑150 CCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTC > 1:235296/1‑148 CCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTC < 2:235296/148‑1 CTTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCA < 2:464304/150‑1 CCGCGAATGGGCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAG > 1:354445/1‑150 CGCGAATGGGCCGTAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGG < 2:601817/150‑1 GAATGGTTCGCAAAGCAGCCCACAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTC > 2:170784/1‑150 GCCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG < 1:179568/150‑1 GATGAGTTGACGCAACAGGGTATTAGCGTGGGGGTTAGCGTGGACTTCTGAATTGCTGGGGGCCGCTTTGCGGCCCATTCGCGGGTGAACCCGCTCCTACGACGGCCTCGTATGCCTGAGGCTTGCGCAACCTTGTAGGAGCGGGTTTACCCGCGAATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/507174‑507013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaatgggcCGCAAAGCGGCCCCCAGCAATTCAGAAGTCCACGCTAACCCCCACGCTAATACCCTGTTGCGTCAACTCATCACTCTTGCGCCAGTTGTAGTTCCCGCGCAAATGCACCCCTGCCACCAGTTCATGGCTCACACCCAGGCTCGCCCGG > NC_002947/507103‑507250 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |