New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 611513	NA (NA)	4 (0.100)	4/240	NT	NA	coding (407/966 nt)	PP_0526	transposase
	?	NC_002947	= 611528	NA (NA)					coding (422/966 nt)	PP_0526	transposase

AAGTACCGGGAAAGTGTTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/611359‑611513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCCGTA  <  NC_002947/611528‑611381                                                                                                                                                                                                                                                                                                                 AAGTACCGGGAAAGTGTTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGCCTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGC                                                                                                                                                           <  1:843132/150‑1      CCGGTAAAGTGTTGCTATACGGGCAAAAACAGCTGCGCTGGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGC                                                                                                                                                      <  2:366289/150‑1      CCGGGAAAGTGTTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGC                                                                                                                                                      >  2:318553/1‑150       CGGGAAAGTGTTGCTATACGGGCAAAAACAGATGCCAATGATGCCGCTTTGCTCGCCCGATTCCTAAACAACGAGCGGGGCTCTTTAAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAAAGCCAGGTGCTGCTGCGACGCCGaccc                                                                                                                                                     >  2:138625/1‑146                 TTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGC                                                                                                                                                        >  1:1058534/1‑137                 TTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGC                                                                                                                                                        <  2:1058534/137‑1                                                                                                        CTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGCACTGCTACAAGTTTGGCGCGGCG                                                                                                                               >  2:216424/1‑75                                                                                                        CTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGCACTGCTACAAGTTTGGCGCGGCG                                                                                                                               <  1:216424/75‑1                                                                                                         TCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGCACTGCTACAAGTTTGGCGCGGCGG                                                                                                                              >  1:876100/1‑75                                                                                                         TCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGCACTGCTACAAGTTTGGCGCGGCGG                                                                                                                              <  2:876100/75‑1                                                                                                                                                     GCCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGC       <  1:681905/150‑1                                                                                                                                                     GCCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGC       <  2:138396/150‑1                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCC      <  1:149734/150‑1                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCC      >  2:462308/1‑150                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGG                                          >  1:215776/1‑114                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGG                                          <  2:215776/114‑1                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCA                                                  >  2:1063013/1‑106                                                                                                                                                      CCGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCA                                                  <  1:1063013/106‑1                                                                                                                                                       CGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCC     <  2:574094/150‑1                                                                                                                                                       CGCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCC     <  2:848529/150‑1                                                                                                                                                        GCGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCCG    >  2:297582/1‑150                                                                                                                                                         CGCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCCGT   <  1:973231/150‑1                                                                                                                                                          GCACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCCGTA  >  1:1065461/1‑150                                                                                                                                                                                                                                                                                                                 AAGTACCGGGAAAGTGTTGCTATACGGGCAAAAACAGATGCCCATGATGCCGCTTTGCTCGCCCGCTTCCTGAGCAACGAGCGGGGCTCTTTGAAGGCTTGGACTCCGCCACCAGCCGGGCATCGTGAGATCCAGGTGCTGCTGCGCCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/611359‑611513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcACTGCTACAAGTTTGGCGCGGCGGCGCAGCAGCACCTGGATCTCACGATGCCCGGCTGGTGGCGGAGTCCAAGCCTTCAAAGAGCCCCGCTCGTTGCTCAGGAAGCGGGCGAGCAAAGCGGCATCATGGGCATCTGTTTTTGCCCGTA  <  NC_002947/611528‑611381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.