New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 786605 | 46 (1.060) | 5 (0.130) | 5/232 | NT | 9.9% | intergenic (+24/‑281) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
? | NC_002947 | = 786691 | 49 (1.240) | intergenic (+110/‑195) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
ACCGGCCAAGGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/786446‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCGCG < NC_002947/786691‑786550 ACCGGCCAAGGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGC > 2:735595/1‑150 CCGGCCAAGGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCT < 2:1035185/150‑1 GCCAAGGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTG > 1:785798/1‑150 GGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGC < 2:128455/150‑1 CTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCC > 1:576460/1‑150 CTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGT > 1:956856/1‑150 CGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAG < 2:576460/150‑1 AGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCG < 2:106743/150‑1 GCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGG < 2:956856/150‑1 CTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCC > 1:769385/1‑150 TGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCGCG > 2:199321/1‑150 ACCGGCCAAGGCGGCCGAGCAGCAACCTGCCCGCAGCGGCGGCTTCAGCGTGAAGTCCGCCTGGGCCGCGCGCCTGGCCGAGCAGGGCGACCGTTGCCGCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/786446‑786605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggccTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGCAGCCGAAGAGACTCAGACGTGACGCTGTTTGGCCTTGCCCCGCG < NC_002947/786691‑786550 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |