| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1054646 = | 53 (1.220) | 3 (0.070) | 3/246 | NT | 5.7% | coding (1189/1332 nt) | PP_0913 | hypothetical protein |
| ? | NC_002947 | 1054696 = | 48 (1.140) | coding (1139/1332 nt) | PP_0913 | hypothetical protein | |||||
GCACCAAGCTTACCGGCCCTAGCCTGTCGTCGCTGGTCGCCAAGGTTGACCCGGCCGCCGATGCAGCCCTCAAGGCCGATCTGGAAGCCACCGAGGCCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1054798‑1054646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTGGTGCCGTCCGGGCGGGTGTACTCGCCCAGGTAGACGTTGCGGATGCCCT > NC_002947/1054696‑1054843 GCACCAAGCTTACCGGCCCTAGCCTGTCGTCGCTGGTCGCCAAGGTTGACCCGGCCGCCGATGCAGCCCTCAAGGCCGATCTGGAAGCCACCGAGGCCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGC < 1:281845/150‑1 CCGATGCAGTCCTCAAGGCCGATCTGGAAGCCACCGAGGCCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGC < 1:1011493/93‑1 CCGATGCAGTCCTCAAGGCCGATCTGGAAGCCACCGAGGCCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGC > 2:1011493/1‑93 CCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGCTGAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTA > 1:1039400/1‑150 CAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGCTGAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAA > 2:840781/1‑150 TTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGCTGAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTG < 2:1039400/150‑1 CTGAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCGTCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTGGTGCCGTCCGGGCGGGTGTACTCGCCCAGGTAGACGTTGCGGATGCC > 2:410269/1‑150 CTGAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTGGTGCCGTCCGGGCGGGTGTACTCGCCCAGGTAGACGTTGCGGATGCC < 1:196910/150‑1 GAAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTGGTGCCGTCCGGGCGGGTGTACTCGCCCAGGTAGACGTTGCGGATGCCCT > 2:735185/1‑150 GCACCAAGCTTACCGGCCCTAGCCTGTCGTCGCTGGTCGCCAAGGTTGACCCGGCCGCCGATGCAGCCCTCAAGGCCGATCTGGAAGCCACCGAGGCCAAGCTTCAGGTGATCGTAGACCACGCCCTCAAAGGCGAGCACTACGACCAGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1054798‑1054646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaAGCTTGGCCTCGGTGGCTTCCAGATCGGCCTTGAGGGCTGCATCGGCGGCCGGGTCAACCTTGGCGACCAGCGACGACAGGCTAGGGCCGGTAAGCTTGGTGCCGTCCGGGCGGGTGTACTCGCCCAGGTAGACGTTGCGGATGCCCT > NC_002947/1054696‑1054843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |