New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1885721	56 (1.290)	3 (0.070)	3/240	NT	5.5%	coding (346/1488 nt)	rmuC	DNA recombination limiting inversions protein
	?	NC_002947	= 1885747	51 (1.250)					coding (372/1488 nt)	rmuC	DNA recombination limiting inversions protein

CAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCTGGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1885607‑1885721 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgtcCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTCGGCTTCGCGATTGGCGCGCTCAAGGCTCCAGGCGTGGGCGGCATCACGGGCGTTGTCGCGATCGATCTGCAGCAGCTCCAGCTCACGGCTTTGGGCGGCCAACTGGGCCTGC  <  NC_002947/1885747‑1885600                                                                                                                                                                                                                                                                         CAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCTGGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTT                                                                                                                   <  1:857368/150‑1        CCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCTGGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTC                                                                                                                  >  1:173318/1‑144        CCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCTGGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTC                                                                                                                  <  2:173318/144‑1                                                                                                               GCGTCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTCGGCTTCGCGATTGGCGCGCTCAAGGCTCCAGGCGTGGGCGGCATCACGGGCGTTGTCGCGATCGATCTGCAGCAGCTCCAGCTCACGGCTTTGGGCGGCCAACTGGGCC     <  2:979286/150‑1                                                                                                                 GTCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTCGGCTTCGCGATTGGCGCGCTCAAGGCTCCAGGCGTGGGCGGCATCACGGGCGTTGTCGCGATCGATCTGCAGCAGCTCCAGCTCACGGCTTTGGGCGGCCAACTGGGCCTG   >  2:1101976/1‑150                                                                                                                  TCCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTCGACTTCGCGATTGGCGCGCTCAAGGCTCCAGGCGTGGGCGGCATCACGGGCGTTGTCGCGATCGATCTGCAGCAGCTCCAGCTCACGGCTTTGGGCGGCCAACTGGGCCTGC  >  2:357261/1‑150                                                                                                                                                                                                                                                                         CAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCTGGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1885607‑1885721 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgtcCAGGCGCGCGGTTTGCGCCTCCAGGCGACGCAGTTCGGCTTCGCGATTGGCGCGCTCAAGGCTCCAGGCGTGGGCGGCATCACGGGCGTTGTCGCGATCGATCTGCAGCAGCTCCAGCTCACGGCTTTGGGCGGCCAACTGGGCCTGC  <  NC_002947/1885747‑1885600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.