| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1961282 | 54 (1.250) | 5 (0.120) | 5/244 | NT | 8.9% | coding (94/600 nt) | PP_1759 | hypothetical protein |
| ? | NC_002947 | = 1961301 | 50 (1.200) | coding (113/600 nt) | PP_1759 | hypothetical protein | |||||
GCACGCCTGATCTATGTGATGGACCCGATGTGCTCCTGGTGCTGGGGTTTTGCGCCAGTGGCTGCGGCCCTGATCGCCCAGGCGCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1961162‑1961282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGGCCGCAGCCACTGGCGCAAAACCCCA < NC_002947/1961301‑1961204 GCACGCCTGATCTATGTGATGGACCCGATGTGCTCCTGGTGCTGGGGTTTTGCGCCAGTGGCTGCGGCCCTGATCGCCCAGGCGCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCGCTGCCGCCGGTACGCAGCCCGCCCGTTAC < 1:306628/150‑1 ATGTGATGGACCCGATGTGCTCCTGGTGCTGGGGTTTTGCGCCAGTGGCTGCGGCCCTGATCGCCCAGGCGCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCGCTGCCGCCGGTACGCAGCCCGCCCGTTA > 1:933609/1‑136 ATGTGATGGACCCGATGTGCTCCTGGTGCTGGGGTTTTGCGCCAGTGGCTGCGGCCCTGATCGCCCAGGCGCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCGCTGCCGCCGGTACGCAGCCCGCCCGTTA < 2:933609/136‑1 GCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCGCTGCCGCCGGTACGCAGCCCGCCC < 1:92572/62‑1 GCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCGCTGCCGCCGGTACGCAGCCCGCCC > 2:92572/1‑62 GCGCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGGCCGCAGCCACTGGCGCAAAACCCCA > 1:93465/1‑101 GCGCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGGCCGCAGCCACTGGCGCAAAACCCCA < 2:93465/101‑1 CGCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGG > 1:357806/1‑75 CGCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGG < 2:357806/75‑1 GCACGCCTGATCTATGTGATGGACCCGATGTGCTCCTGGTGCTGGGGTTTTGCGCCAGTGGCTGCGGCCCTGATCGCCCAGGCGCGTGAGGCAGGCGTGCCTGCCCGCTTGGTAACGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1961162‑1961282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgCTGCCGCCGGTACGCAGCCCGCCCGTTACCAAGCGGGCAGGCACGCCTGCCTCACGCGCCTGGGCGATCAGGGCCGCAGCCACTGGCGCAAAACCCCA < NC_002947/1961301‑1961204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |