New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1967432 = | 68 (1.570) | 3 (0.080) | 3/234 | NT | 5.0% | coding (601/741 nt) | yciK | putative oxidoreductase |
? | NC_002947 | 1967477 = | 52 (1.300) | coding (556/741 nt) | yciK | putative oxidoreductase | |||||
Rejected: Frequency below/above cutoff threshold. |
TGGTGTTCACCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1967590‑1967432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccacgcCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGTGAACACCACCGAAGCGTCTTCCGACAGCTTCAGCAGCG > NC_002947/1967477‑1967620 TGGTGTTCACCAGCAGCAGCGTGGGGCGCAAGGTCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAG > 2:77112/1‑150 TTCACCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGGTCGCCACCGAAGGCCTGATGCAGACCCGGGCTGATGAACTGGAAGGCACGGCGCCGGGGCACGCCAACAGCCTCAACCCAGGCGCC > 2:382424/1‑150 CACCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCAC > 2:454049/1‑150 CACCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCAC < 2:517032/150‑1 CCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGC < 1:228600/150‑1 AAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGC > 2:759261/1‑150 TGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGT > 1:993523/1‑148 TGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGT < 2:993523/148‑1 CCACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGTGAACACCACCGAAGCGTCTTCCGACAGCTTCAGCAGCG > 1:148048/1‑150 CCACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGTGAACACCACCGAAGCGTCTTCCGACAGCTTCAGCAGCG > 1:594632/1‑150 CACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGC < 1:1039956/94‑1 CACGCCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGC > 2:1039956/1‑94 TGGTGTTCACCAGCAGCAGCGTGGGGCGCAAGGGCCGGGCTTACTGGGGCGCCTATGGCGTGTCGAAGTTCGCCACCGAAGGCCTGATGCAGACCCTGGCTGATGAACTGGAAGGCGTGGCGCCGGTGCGCGCCAACAGCATCAACCCAGGCGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1967590‑1967432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccacgcCTTCCAGTTCATCAGCCAGGGTCTGCATCAGGCCTTCGGTGGCGAACTTCGACACGCCATAGGCGCCCCAGTAAGCCCGGCCCTTGCGCCCCACGCTGCTGCTGGTGAACACCACCGAAGCGTCTTCCGACAGCTTCAGCAGCG > NC_002947/1967477‑1967620 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |