New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2003635	19 (0.440)	3 (0.070)	3/242	NT	13.9%	coding (93/1011 nt)	PP_1787	hypothetical protein
	?	NC_002947	= 2003657	19 (0.460)					coding (115/1011 nt)	PP_1787	hypothetical protein

TGCAGTAGGAAGGAAGCTTATAAAATGAAAGTTACAAATATAGGGCTGTCCTCAGTCGTGATTGAATTTGCGAGCGTCAATGCTTCCAAATTTATAAATCTTAGCCAGGCGCAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2003519‑2003635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtTCACCCATTTGAATGGCACCTCACGCTGCGCCTGGCTAAGATTTATAAATTTGGAAGCATTGACGCTCGCAAATTCAATCACGACTGAGGACAGCCCTATATTTGTAACTTTCATTTTATAAGCTTCCTTCCTACTGCATCGCCATCT  <  NC_002947/2003657‑2003510                                                                                                                                                                                                                                                                           TGCAGTAGGAAGGAAGCTTATAAAATGAAAGTTACAAATATAGGGCTGTCCTCAGTCGTGATTGAATTTGCGAGCGTCAATGCTTCCAAATTTATAAATCTTAGCCAGGCGCAGCGTTCACCCATTTGAATGGCACCTCACGCTGCGCCT                                                                                                                     <  2:898996/150‑1                                                    TCAGTCGTGATTGAATTTGCGAGCGTCAATGCTTCCAAATTTATAAATCTTAGCCAGGCGCAGCGTTCACCCATTTGAATGGCACCTCACGCTGCGCCTG                                                                                                                    <  1:694967/100‑1                                                    TCAGTCGTGATTGAATTTGCGAGCGTCAATGCTTCCAAATTTATAAATCTTAGCCAGGCGCAGCGTTCACCCATTTGAATGGCACCTCACGCTGCGCCTG                                                                                                                    >  2:694967/1‑100                                                                                                                    GTTCACCCATTTGAATGGCACCTCACGCTGCGCCTGGCTAAGATTTATAAATTTGGAAGCATTGACGCTCGCAAATTCAATCACGACTGAGGACAGCCCTATATTTGTAACTTTCATTTTATAAGCTTCCTTCCTACTGCATCGCCATCT  <  1:654723/150‑1                                                                                                                    GTTCACCCATTTGAATGGCACCTCACGCTGCGCCTGGCTAAGATTTATAAATTTGGAAGCATTGACGCTCGCAAATTCAATCACGACTGAGGACAGCCCTATATTTGTAACTTTCATTTTATAAGCTTCCTTCCTACTGCATCGCCATCT  >  2:292114/1‑150                                                                                                                                                                                                                                                                           TGCAGTAGGAAGGAAGCTTATAAAATGAAAGTTACAAATATAGGGCTGTCCTCAGTCGTGATTGAATTTGCGAGCGTCAATGCTTCCAAATTTATAAATCTTAGCCAGGCGCAGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2003519‑2003635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtTCACCCATTTGAATGGCACCTCACGCTGCGCCTGGCTAAGATTTATAAATTTGGAAGCATTGACGCTCGCAAATTCAATCACGACTGAGGACAGCCCTATATTTGTAACTTTCATTTTATAAGCTTCCTTCCTACTGCATCGCCATCT  <  NC_002947/2003657‑2003510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.