| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2032853 = | NA (NA) | 3 (0.070) | 3/242 | NT | 20.8% | coding (291/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2032878 = | 12 (0.280) | coding (316/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
GCTGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGAcggcct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2033000‑2032853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAACATTG > NC_002947/2032878‑2033031 GCTGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACG > 1:764493/1‑150GCTGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACG > 2:762735/1‑150 CTGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGG > 2:946795/1‑150 CTGTAGCCGCGCCACAGGCCACCCTGAATGCGACCAACCAGTTAGGTAATATGGTTGCCCACATTGTGCACCCCCCGCATGACGTTCATGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGG < 2:1081689/150‑1 TGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGGC > 1:821924/1‑150 TCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGG > 1:97403/1‑150 AGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTA < 1:530992/107‑1 AGGCCGGCGCAAGGCGGTGTGCAGCACCGGACGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTA > 2:530992/1‑107 CCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTTATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAACAgt < 2:386370/150‑3 CTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAACATTG > 1:143835/1‑150 GCTGTAGCCGCGCCACAGGCCATCGTGAATGCGACCAACCAGTTCGGTAATCTGGTTGAGCACCTTGTGCACTTCCGGCATGACGTTCACGCCGTTGACGCTGAGTTTGTCACCTACAGGCCGGCGCAAGGCGGTGTGCAGCACCGGAcggcct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2033000‑2032853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAACATTG > NC_002947/2032878‑2033031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |