| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2283665 = | 49 (1.130) | 6 (0.150) | 5/242 | NT | 11.6% | coding (193/978 nt) | PP_2011 | hypothetical protein |
| ? | NC_002947 | 2283716 = | 45 (1.090) | coding (142/978 nt) | PP_2011 | hypothetical protein | |||||
CGCAGGATGACGCCATTCGCCCAGCTTCACGACCTGCCCCGACAACTGCAGCACTCCACCGTGCGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2283818‑2283665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGCACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCATCCTGCGAGCATAGCCGGTTTGCC > NC_002947/2283716‑2283835 CGCAGGATGACGCCATTCGCCCAGCTTCACGACCTGCCCCGACAACTGCAGCACTCCACCGTGCGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGG < 2:542900/150‑1 TTCGCCCAGCTTCACGACCTGCCCCGACAACTGCAGCACTCCACCGTGCGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGG > 1:904825/1‑135 TTCGCCCAGCTTCACGACCTGCCCCGACAACTGCAGCACTCCACCGTGCGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGG < 2:904825/135‑1 CACCGTGTGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGG < 1:1096332/95‑1 CACCGTGTGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGG > 2:1096332/1‑95 TGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGG < 1:322176/85‑1 TGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGG > 2:322176/1‑85 TCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGCACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCA > 1:771391/1‑150 TCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGCACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCA > 2:109909/1‑150 CCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGGGCG‑GGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGTACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCATCCTGCGA > 2:565331/1‑150 GACACCCGCTGGCGGGCAGCCTGTGGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGCACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCATCCTGCGAGCATAGCCGGTTTGCC < 2:771391/150‑1 ACACCCGCTGGCGGGCAGCCTGTGGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAG > 1:418159/1‑63 ACACCCGCTGGCGGGCAGCCTGTGGGCGCTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAG < 2:418159/63‑1 CGCAGGATGACGCCATTCGCCCAGCTTCACGACCTGCCCCGACAACTGCAGCACTCCACCGTGCGTGACCTGGCATGGGCCTTGTTGTCGCCGCCCCTGCTCAGCGCCCCGCCCTGCCCCCAGCGACACCCGCTGGCGGGCAGCCTGTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2283818‑2283665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcTGAGCAGGGGCGGCGACAACAAGGCCCATGCCAGGTCACGCACGGTGGAGTGCTGCAGTTGTCGGGGCAGGTCGTGAAGCTGGGCGAATGGCGTCATCCTGCGAGCATAGCCGGTTTGCC > NC_002947/2283716‑2283835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |