| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2452851 = | 56 (1.290) | 3 (0.070) | 3/240 | NT | 6.1% | coding (2311/3450 nt) | mfd | transcription‑repair coupling factor |
| ? | NC_002947 | 2452893 = | 39 (0.950) | coding (2269/3450 nt) | mfd | transcription‑repair coupling factor | |||||
GTACGCTTCAAGGACCTGGGCCTGGCCATCATCGATGAAGAGCACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGCTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2453004‑2452851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcggTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGATGATGGCCAGGCCCAGGTCCTTGAAGCGTACGTCGTCCTGCAGCAGCTTGTGGGTGCCGATGA > NC_002947/2452893‑2453036 GTACGCTTCAAGGACCTGGGCCTGGCCATCATCGATGAAGAGCACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGGTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTG < 2:639491/150‑1GTACGCTTCAAGGACCTGGGCCTGGCCATCATCGATGAAGAGCACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGATGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTG < 2:639205/150‑1 TTCAAGGACCTGGGCCTGGCCATCATCGATGAAGAGCACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGCTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCtggc > 1:788168/1‑146 CACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGCTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGG < 1:802819/112‑1 CACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGCTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGG > 2:802819/1‑112 TCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGGTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGATGATGGCCAGGCCCAGGT > 1:566085/1‑150 CCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGGTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGAT < 1:840006/129‑1 CCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGGTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGAT > 2:840006/1‑129 TGGCGGTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGATGATGGCCAGGCCCAGGTCCTTGAAGCGTACGTCGTCCTGCAGCAGCTTGTGGGTGCCGATGA < 1:760304/150‑1 GTACGCTTCAAGGACCTGGGCCTGGCCATCATCGATGAAGAGCACCGCTTTGGCGTGCGCCAGAAAGAACAGCTGAAGGCGCTGCGCAGCGAGGTCGATATCCTCACCCTGACCGCCACGCCGATTCCGCGCACGCTGAACATGGCGGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2453004‑2452851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcggTCAGGGTGAGGATATCGACCTCGCTGCGCAGCGCCTTCAGCTGTTCTTTCTGGCGCACGCCAAAGCGGTGCTCTTCATCGATGATGGCCAGGCCCAGGTCCTTGAAGCGTACGTCGTCCTGCAGCAGCTTGTGGGTGCCGATGA > NC_002947/2452893‑2453036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |