New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 272080539 (0.900)3 (0.080) 5/234 NT 7.5% intergenic (+16/+34) PP_2380/PP_2381 hypothetical protein/hypothetical protein
?NC_002947 = 2720810 38 (0.950)intergenic (+21/+29) PP_2380/PP_2381 hypothetical protein/hypothetical protein

TGAAGGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2720647‑2720805
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgcTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCAGA  <  NC_002947/2720810‑2720669
                                                                                                                                                                                                                                                                                                              
TGAAGGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCA                                                                                                                                                          >  2:718910/1‑150
     GAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGG                                                                                                                                                     <  1:541180/150‑1
        GGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCG                                                                                                                                                  >  1:745284/1‑150
        GGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCG                                                                                                                                                  >  2:474092/1‑150
                        TGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCTTT                                                                                                                                 <  2:930660/150‑1
                                                                                                                                   ATGAACCACTGACAGATCAAAGGGCCGCGTTCAGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTT                                    >  1:999894/1‑136
                                                                                                                                   ATGAACCACTGACAGATCAAAGGGCCGCGTTCAGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTT                                    <  2:999894/136‑1
                                                                                                                                                AGATCAAAGGGCCGCGTTCAGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCA                                                                                         >  1:638961/1‑70
                                                                                                                                                AGATCAAAGGGCCGCGTTCAGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCA                                                                                         <  2:638961/70‑1
                                                                                                                                                       AGGGCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCAGA  <  2:953653/150‑1
                                                                                                                                                                                                                                                                                                              
TGAAGGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2720647‑2720805
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgcTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCAGA  <  NC_002947/2720810‑2720669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.