New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3665255	53 (1.220)	3 (0.070)	3/250	NT	5.5%	coding (120/957 nt)	PP_3229	aliphatic sulfonate‑binding protein
	?	NC_002947	= 3665275	50 (1.170)					coding (140/957 nt)	PP_3229	aliphatic sulfonate‑binding protein

CCTGCGCATCGGCTACCAGAAATCCTCGACCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3665219‑3665255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgCCCCTGGCCTTCAG‑‑CAGGGTCAGCAGGGTCGAGGATTTCTGGTAGCCGATGCGCAGGGTCTGCTCGGCGCTGGCAAGGCTTGGCAGCAAGGCGCTGGCGAGCAGCGCCAGGCCCAGCTGGCGCAGGGGTTTAAAGGTCATGAATACGT  <  NC_002947/3665275‑3665128                                                                                                                                                                                             CCTGCGCATCGGCTACCAGAAATCCTCGACCCTGCTGCCCCTGGCCTTCAG‑‑CAGGGTCA                                                                                                                                <  1:956833/59‑1 CCTGCGCATCGGCTACCAGAAATCCTCGACCCTGCTGCCCCTGGCCTTCAG‑‑CAGGGTCA                                                                                                                                >  2:956833/1‑59                   GAAATCCTCGACCCTGCTGACCCTG‑‑CTGAAGGCCAGGGGCAGCAGGGTCGAGGATTTCTGGTAGCCGATGCGCAGGGTCTGCACGGCGCTGGCAAGACTTGGCAGCAAGGCGCTGGCGAGCAGCGCCAGGCCCAGCTGGCGCAGGGGTTT                   >  2:603686/1‑150                                    TGCCCCTGGCCTTCAG‑‑CAGGGTCAGCAGGGTCGAGGATTTCTGGTAGCCGATGCGCAGGGTCTGCTCGGCGCTGGCAAGGCTTGGCAGCAAGGCGCTGGCGAGCAGCGCCAGGCCCAGCTGGCGCAGGGGTTTAAAGGTCATGAATACGT  <  2:134708/150‑1                                                                                                                                                                                             CCTGCGCATCGGCTACCAGAAATCCTCGACCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3665219‑3665255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgCCCCTGGCCTTCAG‑‑CAGGGTCAGCAGGGTCGAGGATTTCTGGTAGCCGATGCGCAGGGTCTGCTCGGCGCTGGCAAGGCTTGGCAGCAAGGCGCTGGCGAGCAGCGCCAGGCCCAGCTGGCGCAGGGGTTTAAAGGTCATGAATACGT  <  NC_002947/3665275‑3665128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.