New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3783067 =	50 (1.150)	3 (0.080)	3/234	NT	7.1%	coding (115/771 nt)	nikD	nickel ABC transporter ATP‑binding protein
	?	NC_002947	3783174 =	33 (0.830)					coding (222/771 nt)	nikD	nickel ABC transporter ATP‑binding protein

GCGCGGGTTTTGCAGCACCAGGCTGGTCAGGCGACCTCTGACACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3783225‑3783067 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgctggcTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAAAACCCGCGCAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCAT  >  NC_002947/3783174‑3783317                                                                                                                                                                                                                                                                                                                 GCGCGGGTTTTGCAGCACCAGGCTGGTCAGGCGACCTCTGACACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGA                                                                                                                                                           <  2:787665/150‑1  CGCGGGTTTTGCAGCACCAGGCTGGTCAGGCGACCTCTGACACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAG                                                                                                                                                          <  1:94832/150‑1         TTTGCAGCACCAGGCTGGTCAGGCGACCTCTGACACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGG                                                                                                                                                   <  2:547205/150‑1                                           ACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGGCTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCT                                                                                                                 >  2:961041/1‑150                                                     GCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGGCTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAA                                                                                                       >  2:64877/1‑150                                                                   GTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGGCTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAAAACCCGCGCAGCGC                                                                                         <  1:961041/150‑1                                                                                                                                                      AGCCGCTGGCTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAAAACCCGCGCAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC      >  1:284479/1‑150                                                                                                                                                          GCTGGCTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAAAACCCGCGCAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCAT  >  1:975635/1‑150                                                                                                                                                                                                                                                                                                                 GCGCGGGTTTTGCAGCACCAGGCTGGTCAGGCGACCTCTGACACTGCTTGCAGCCAGCGGCTGGCCGTCGAGCAGCAGTTGTCCTTGGGTGCGGGCGAGGCCAGGTGGTAGCAGGTCGAGCAAGCCAAGGCAGCTGAGGGATTTGCCAGAGCCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3783225‑3783067 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgctggcTGCAAGCAGTGTCAGAGGTCGCCTGACCAGCCTGGTGCTGCAAAACCCGCGCAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCAT  >  NC_002947/3783174‑3783317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.