New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3915262 | 59 (1.360) | 6 (0.140) | 5/244 | NT | 9.3% | coding (187/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
? | NC_002947 | = 3915282 | 60 (1.440) | coding (207/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
AACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3915173‑3915262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcACGCACTTCGGCGGTGCGTGGCGCGAG < NC_002947/3915282‑3915256 AACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCACGCACTTCGGCGGTGCGTGGCGCGA > 1:417195/1‑116 AACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCACGCACTTCGGCGGTGCGTGGCGCGA < 2:417195/116‑1 AAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCGCGCACTTCGGCGGTGCGTGGCGCGAG < 1:802229/99‑1 AAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCGCGCACTTCGGCGGTGCGTGGCGCGAG > 2:802229/1‑99 CCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCACGCACTTCGGCGGTGCGTGGCGCGA > 1:293286/1‑82 CCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGCACGCACTTCGGCGGTGCGTGGCGCGA < 2:293286/82‑1 AACAGGCCCCCACCGCGCAAGTGCGCGTAGAAACCCTGCAACTGCAGCCACTGGCCATCAGCAGTGAACTCAGCGGCCGTATCCTCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3915173‑3915262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcACGCACTTCGGCGGTGCGTGGCGCGAG < NC_002947/3915282‑3915256 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |