New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4599018 = | 47 (1.080) | 7 (0.170) | 6/244 | NT | 12.8% | coding (837/3627 nt) | PP_4071 | membrane protein |
? | NC_002947 | 4599066 = | 50 (1.200) | coding (789/3627 nt) | PP_4071 | membrane protein |
GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4599170‑4599018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC > NC_002947/4599066‑4599213 GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTG > 2:687617/1‑150 ATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGG > 2:979778/1‑150 CCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTT > 1:344342/1‑108 CCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTT < 2:344342/108‑1 AACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGA > 2:880486/1‑150 CCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCA > 2:310845/1‑150 CTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTC > 1:537994/1‑137 CTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTC < 2:537994/137‑1 CTGCGCACACGTCTTTACGAGGTGAGCAG‑CAGGTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGA > 1:521789/1‑150 ACACGTCTTTACGAGGTGAGCAG‑CAGGTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGC < 2:521789/150‑1 CGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGc < 1:880486/150‑2 GCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC > 1:702358/1‑150 GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4599170‑4599018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC > NC_002947/4599066‑4599213 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |