| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5112607 = | 44 (1.020) | 3 (0.080) | 3/210 | NT | 8.5% | intergenic (‑148/+118) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| ? | NC_002947 | 5112712 = | 28 (0.780) | intergenic (‑253/+13) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein | |||||
AGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112771‑5112607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTG > NC_002947/5112712‑5112848 AGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGC > 1:541034/1‑150 AGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAA < 1:723295/150‑1 AGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAA < 2:331048/150‑1 CCTGCGCCGCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA < 2:246707/150‑1 GAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGC < 2:541034/150‑1 CTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGC > 1:552477/1‑150 GGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCA < 1:1021262/140‑1 GGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCA > 2:1021262/1‑140 AAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAG < 2:652552/73‑1 AAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAG > 1:652552/1‑73 ACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGGGCCTTGATCTCCTCCTCCACCGGAGGCGCAGGCTCCTCTCCCCGCAGATCACCAA > 2:990754/1‑150 ACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAG < 1:425694/63‑1 ACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAG > 2:425694/1‑63 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTNAGG > 1:612546/1‑150 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATG < 1:1077848/123‑1 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATG > 2:1077848/1‑123 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAG < 1:966235/67‑1 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAG > 2:966235/1‑67 CGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAG < 1:253694/150‑1 GAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGC > 2:109208/1‑40 GAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGC < 1:109208/40‑1 AAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCT > 2:602784/1‑150 AGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTG < 2:995593/150‑1 AGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112771‑5112607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTG > NC_002947/5112712‑5112848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |