| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5190394 | 26 (0.600) | 3 (0.080) | 3/234 | NT | 11.1% | intergenic (‑81/+93) | PP_4570/cysK | hypothetical protein/cysteine synthase A |
| ? | NC_002947 | = 5190411 | 24 (0.600) | intergenic (‑98/+76) | PP_4570/cysK | hypothetical protein/cysteine synthase A | |||||
CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5190238‑5190394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcccgccCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < NC_002947/5190411‑5190264 CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGA > 1:166232/1‑150 CCTTGGCTGCAAAGGAAAAGGTCATGCTTTCGCGCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGGTGAGCGGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGAT < 1:192311/150‑1 GCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGA < 1:775168/124‑1 GCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGA > 2:775168/1‑124 CCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < 1:970417/150‑1 CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5190238‑5190394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcccgccCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < NC_002947/5190411‑5190264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |