| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5299581 = | 47 (1.080) | 4 (0.100) | 4/238 | NT | 8.1% | coding (569/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| ? | NC_002947 | 5299642 = | 47 (1.160) | coding (508/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease | |||||
ATACGCCTGGCCAGCAAGCGCGGCCGCTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299737‑5299581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgcaGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAA > NC_002947/5299642‑5299789 ATACGCCTGGCCAGCAAGCGCGGCCGCTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTC < 1:924038/150‑1ATACGCATGGCCAGCAAGCGCGGCCGCTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTC > 2:1076513/1‑150 GCCTGGCCAGCAAGCGCGGCCGCTTGTACGCAGTGGTGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGC < 2:411881/150‑1 CTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAA > 1:1053779/1‑131 CTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAA < 2:1053779/131‑1 TGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCA > 1:581838/1‑150 CAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAACCGGCCGCGCTTGCTGGCCAGGCGT > 2:378240/1‑150 CGCAGGGCCTGGCCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTT < 1:520980/150‑1 GCAGGTCCTGCTGGATGCGCCGCTCGTAACTACAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTAGCCAGGCGTATCACCAGCGCCCACCAGCGGGGTGGCGCTGATGCGCTCAAGCCCGGCATTTA > 2:229907/1‑150 CAGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAA < 2:947533/150‑1 ATACGCCTGGCCAGCAAGCGCGGCCGCTTGTACGCAGTGGCGAGCGCCTTTACCTGCGCCGTTACTGGAGTTACGAGCGGCGCATCGACCAGGCCCTGCGCCAGCGCCTGAGTCAGGCCGAAGCACCGCCTGCGGACCTGCCAGAGCGTCTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299737‑5299581‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgcaGGGCCTGGTCGATGCGCCGCTCGTAACTCCAGTAACGGCGCAGGTAAAGGCGCTCGCCACTGCGTACAAGCGGCCGCGCTTGCTGGCCAGGCGTATCACCTGCGGCCACCAGCGGGCTGGCGCTGATGCGCTGAAGCCAGGCATTTAA > NC_002947/5299642‑5299789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |