| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5668826 | 33 (0.760) | 6 (0.140) | 4/248 | NT | 16.4% | coding (771/1395 nt) | ahcY | adenosylhomocysteinase |
| ? | NC_002947 | = 5668852 | 29 (0.690) | coding (797/1395 nt) | ahcY | adenosylhomocysteinase | |||||
CAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5668739‑5668826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgAACGGCGAGACCAGCTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCAATTTCGGAGACCTTGACGATCATGCCTTCCTGACGCAGGGACTGGGCCGAGC < NC_002947/5668852‑5668744 CAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCCGGC > 2:529450/1‑123CAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAGGC < 1:529450/123‑1 TCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAG > 1:235939/1‑97 TCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAG > 1:790694/1‑97 TCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAG < 2:235939/97‑1 TCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAG < 2:790694/97‑1 ATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCAATTTCGGAGACCTTGACGATCATGCCTTCCTGACGCAGGGACTGGGCCGAGC < 1:726179/112‑1 ATGAACGGCGAGACCAGCTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCAATTTCGGAGACCTTGACGATCATGCCTTCCTGACGCAGGGACTGGGCCGAGC > 2:726179/1‑112 CAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5668739‑5668826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgAACGGCGAGACCAGCTCGAAGCCGTCCATGCAGGCCTGCATGGCGCAGATCGGGTCAATTTCGGAGACCTTGACGATCATGCCTTCCTGACGCAGGGACTGGGCCGAGC < NC_002947/5668852‑5668744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |