New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5714220 = | 66 (1.520) | 5 (0.120) | 5/244 | NT | 6.7% | coding (1613/1623 nt) | ubiB | 2‑octaprenylphenol hydroxylase |
? | NC_002947 | 5714263 = | 76 (1.830) | intergenic (+33/‑40) | ubiB/hisI | 2‑octaprenylphenol hydroxylase/phosphoribosyl‑AMP cyclohydrolase |
TGTGGTCCTGGGCGATCGCCGGTACCAGGCCATCGCTGTTCCACTTGATCTCGTCCAGCCAGTCTTTCATCGTCGACTCCAAAGCGGGCCCGCTCCTGTGCCGGGCCCTTTGCGCTAGTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5714372‑5714220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTG > NC_002947/5714263‑5714411 TGTGGTCCTGGGCGATCGCCGGTACCAGGCCATCGCTGTTCCACTTGATCTCGTCCAGCCAGTCTTTCATCGTCGACTCCAAAGCGGGCCCGCTCCTGTGCCGGGCCCTTTGCGCTAGTGTGCCAGCCACAGGCGCGGCTGGCTATTGGC < 2:1080333/150‑1 CGGGCCCTTTGCGCTAGTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCAAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCG > 2:465043/1‑150 GCTAGTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCAAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCGCCCAGGACCACA > 1:711723/1‑150 GTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCAAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGA < 1:1091614/131‑1 GTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCAAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGA > 2:1091614/1‑131 GGCTGGCTATTGGCGCAAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATG < 1:465043/150‑1 AAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTG > 1:328588/1‑150 TGTGGTCCTGGGCGATCGCCGGTACCAGGCCATCGCTGTTCCACTTGATCTCGTCCAGCCAGTCTTTCATCGTCGACTCCAAAGCGGGCCCGCTCCTGTGCCGGGCCCTTTGCGCTAGTGTGCCAGCCACAGGCGCGGCTGGCTATTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5714372‑5714220 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaAAGGGCCCGGCACAGGAGCGGGCCCGCTTTGGAGTCGACGATGAAAGACTGGCTGGACGAGATCAAGTGGAACAGCGATGGCCTGGTACCGGCGATCGCCCAGGACCACAAGACCGGACGCGTGCTGATGATGGCCTGGATGAACCGTG > NC_002947/5714263‑5714411 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |