| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5791892 = | 44 (1.020) | 3 (0.080) | 3/226 | NT | 6.7% | intergenic (‑119/+76) | hemE/gltD | uroporphyrinogen decarboxylase/glutamate synthase subunit beta |
| ? | NC_002947 | 5791957 = | 45 (1.170) | intergenic (‑184/+11) | hemE/gltD | uroporphyrinogen decarboxylase/glutamate synthase subunit beta | |||||
GCGCGGTTCGGACCTGGTGGTGACTGCGATCTTCGAAGGGCGTACGGCTGCCGAGGGTATCCTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5792049‑5791892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcccgcgaaCAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAACTTGCC > NC_002947/5791957‑5792105 GCGCGGTTCGGACCTGGTGGTGACTGCGATCTTCGACGGGCGTACGGCTGCCGAGGGTATCTTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATG < 1:1031545/150‑1 GCGGTTCGGACCTGGTGGTGACTGCGATCTTCGAAGGGCGTACGGCTGCCGAGGGTATCCTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCC > 1:1075323/1‑150 GGTTCGGACCTGGTGGTGACTGCGATCTTCGAAGGGCGTACGGCTGCCGAGGGTATCCTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCACGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCG < 2:1076647/150‑1 CGGACCTGGTGGTGACTGCGATCTTCGAAGGGCGTACGGCTGCCGAGGGTATCCTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAA < 2:320289/150‑1 CTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGT > 1:989479/1‑150 GCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCG > 2:435158/1‑150 GCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGT < 2:989479/150‑1 GCATGCCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCAGGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTG > 1:520358/1‑150 TGCCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTT > 1:943236/1‑150 CCCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGA > 2:685999/1‑150 CCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAA < 1:320289/150‑1 CCGCGAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAA > 2:483062/1‑150 GAACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAACTTG < 1:388186/150‑1 ACAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAACTTGCC < 2:520358/150‑1 GCGCGGTTCGGACCTGGTGGTGACTGCGATCTTCGAAGGGCGTACGGCTGCCGAGGGTATCCTGGACTACCTCGAAGTCTGAGCTTCGACCTGTTCGCGGGCATGCCCGCTCCCGCAGGGTTAAGCGCAGAACCCGTGGGGGCAGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5792049‑5791892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatgcccgcgaaCAGGTCGAAGCTCAGACTTCGAGGTAGTCCAGGATACCCTCGGCAGCCGTACGCCCTTCGAAGATCGCAGTCACCACCAGGTCCGAACCGCGCACCATGTCGCCACCGGCAAACACTTTCGGGTTGCTGGTCTGGTGCTTGAACTTGCC > NC_002947/5791957‑5792105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |