| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6045574 = | 53 (1.220) | 5 (0.120) | 5/248 | NT | 9.2% | coding (593/768 nt) | PP_5298 | glutamine amidotransferase |
| ? | NC_002947 | 6045623 = | 47 (1.110) | coding (544/768 nt) | PP_5298 | glutamine amidotransferase | |||||
CTGGAGGTGCAATACGGCCCTCGCCACTCGGTCAGCATCGAGCCTGGCGGGTTGTTCGAGCGCCTGGGGTTGGTGGCGCAGTTCGAGGTCAATTCGCTGCACAGCCAGGGCATCGACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6045725‑6045574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCCAGGGGGGCGTCCTCAGGTTCGCGGTGGTCAAGGTAGCCAGGCAGTTC > NC_002947/6045623‑6045770 CTGGAGGTGCAATACGGCCCTCGCGACTCGGTCAGCATCGAGCCTGGCGGGTTGTTCGAGCGCCTGGGGTTGGTGGCGCAGTTCGAGGTCAATTCGCTGCACAGCCAGGGCATCGACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGG > 2:751825/1‑150 GCCAGGGCATCGACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCC > 2:393614/1‑150 CCAGGGCATCGACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCCA > 2:623259/1‑150 ACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGT > 1:195591/1‑115 ACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGT < 2:195591/115‑1 TCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCCAGGGGGGCGTCCTCAG < 1:393614/150‑1 GCTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCCAGGGGGGCGTCCTCAGGTTCGCGGTGGTCAAGGTAGCCAGGCAGTTC < 1:691772/150‑1 CTGGAGGTGCAATACGGCCCTCGCCACTCGGTCAGCATCGAGCCTGGCGGGTTGTTCGAGCGCCTGGGGTTGGTGGCGCAGTTCGAGGTCAATTCGCTGCACAGCCAGGGCATCGACCGTCTGGCCCCAGGCCTGCGCGTCGAGGCACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6045725‑6045574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGTGCAGCGAATTGACCTCGAACTGCGCCACCAACCCCAGGCGCTCGAACAACCCGCCAGGCTCGATGCTGACCGAGTGGCGAGGGCCGTATTGCACCTCCAGGGGGGCGTCCTCAGGTTCGCGGTGGTCAAGGTAGCCAGGCAGTTC > NC_002947/6045623‑6045770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |