New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	171284 =	NA (NA)	4 (0.100)	4/242	NT	NA	intergenic (+465/‑105)	PP_0159/PP_16SA	family III CoA‑transferase/16S ribosomal RNA
	?	NC_002947	171337 =	NA (NA)					intergenic (+518/‑52)	PP_0159/PP_16SA	family III CoA‑transferase/16S ribosomal RNA

AAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCT  >  NC_002947/171137‑171397                                                                                                                                                    |                                                                                                                  aaaaTAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCa                                                                                                                 <  1:423632/150‑1 (MQ=32)           cTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAg                                                                                                       <  1:887953/150‑1 (MQ=32)            ttGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACTAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTTGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGt                                                                                                      <  2:1077500/150‑1 (MQ=17)              gACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGa                                                                                                    <  1:487236/150‑1 (MQ=32)                           gAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAAt                                                                                       <  1:342172/150‑1 (MQ=32)                                  tAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAg                                                                                >  1:680440/1‑150 (MQ=32)                                      aTGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCAt                                                                            >  2:1017568/1‑150 (MQ=32)                                          gcgcCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTga                                                                        >  1:1068822/1‑150 (MQ=32)                                                            aaaGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCATGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGttt                                                      >  1:1108673/1‑150 (MQ=17)                                                                       ccAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTa                                           >  2:1126607/1‑150 (MQ=32)                                                                           aCGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTaaaaa                                       <  1:1017568/150‑1 (MQ=32)                                                                                     aCAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGt                             <  2:1068822/150‑1 (MQ=32)                                                                                           cGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGaa                       <  1:997588/150‑1 (MQ=32)                                                                                             aaTCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTa                                                     >  1:721914/1‑118 (MQ=33)                                                                                             aaTCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTa                                                     <  2:721914/118‑1 (MQ=33)                                                                                                 aaGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACAATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAag                 >  1:415406/1‑150 (MQ=17)                                                                                                  aGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAaga                <  2:595369/150‑1 (MQ=32)                                                                                                     aaTTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGtt             <  2:901692/150‑1 (MQ=32)                                                                                                          gtgtGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAACATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATc        >  2:539207/1‑150 (MQ=17)                                                                                                              gggTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATgg    <  1:87672/150‑1 (MQ=32)                                                                                                              gggTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATgg    >  1:696213/1‑150 (MQ=32)                                                                                                                gTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCt  >  1:251374/1‑150 (MQ=32)                                                                                                                                                    |                                                                                                                  AAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACCATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCT  >  NC_002947/171137‑171397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.