New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 730706 | 46 (1.060) | 3 (0.070) | 3/242 | NT | 6.2% | coding (243/2565 nt) | clpB | chaperone protein ClpB |
? | NC_002947 | = 730725 | 47 (1.140) | coding (262/2565 nt) | clpB | chaperone protein ClpB |
GTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCG > NC_002947/730557‑730854 | gTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTG > 2:51213‑M1/1‑150 (MQ=255) aCCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACa > 2:1021864/1‑150 (MQ=255) aCCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACa > 2:1093776/1‑150 (MQ=255) ccTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACAt < 1:1093776/150‑1 (MQ=255) cTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATg > 1:725537/1‑150 (MQ=255) ttACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCg > 1:210314/1‑150 (MQ=255) gcgcTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGTTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGAc > 1:896258/1‑150 (MQ=255) cgcTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGATTACGTGCAACTGTCTAATATTCTGAACCCTACCGGCGACGTGAACATGTCGCAGGACt < 1:690472/150‑1 (MQ=255) tgctCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTgg > 1:1123713/1‑150 (MQ=255) ctCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGAGAACAACAAGGGGCTCGACCAACTGCCGAAAATACAGAACCCTACGGGGGCAGTGGAAATGGCGCAGTGCGTGGCa > 1:1093065/1‑150 (MQ=255) cTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGTCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGca < 1:64029‑M2/150‑3 (MQ=255) gggCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTAGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGccaagtcctgcgacatgttcacgtcgccggta < 2:1055676‑M1/150‑33 (MQ=255) ggcggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGTCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAAc < 2:64029/150‑1 (MQ=255) ggcggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAAc < 1:51213/150‑1 (MQ=255) cggcTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCa < 2:857659/150‑1 (MQ=255) tCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGTACCCTACCGGCGACGTGAACATGTCGCCGGACTTGGCACGTCTGCTTAACCAGGCa < 2:582835/150‑1 (MQ=255) aCCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAg < 2:92922/115‑1 (MQ=255) aCCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAg > 1:92922/1‑115 (MQ=255) aCCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCt < 1:49041/150‑1 (MQ=255) tgATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcagc < 2:970014/150‑1 (MQ=255) gATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcag < 1:671908/148‑1 (MQ=255) gATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCAcag > 2:671908/1‑148 (MQ=255) agttAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAgg < 2:130464/147‑1 (MQ=255) ggTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAggg > 1:175898/1‑150 (MQ=255) gCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGAcc > 1:207455/1‑150 (MQ=255) ttCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCAGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAg > 2:601565/1‑150 (MQ=255) aCATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGccaagtcctgcgacatgttcacgtc < 1:709175‑M1/102‑26 (MQ=255) aCATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGccaagtcctgcgacatgttcacgtc > 2:709175‑M1/1‑77 (MQ=255) aCATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCa > 1:1004767/1‑150 (MQ=255) aTCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCAtt > 2:147297/1‑150 (MQ=255) aTCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCAtt < 1:147297/150‑1 (MQ=255) ccggcgcCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAAAATGTCGCAGGACTTGGCACGTCTGGTTAACCAGGCAGGCCGCAGTGCTCAGCAGAAGGGCGACCAGTTCATTTCCAGCGa < 1:933089/147‑1 (MQ=255) gcgcCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCt < 2:1002499/150‑1 (MQ=255) ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt < 2:692242/150‑1 (MQ=255) ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt < 2:692747/150‑1 (MQ=255) ggggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCt > 2:1079346/1‑150 (MQ=255) gggCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTg > 1:876436/1‑150 (MQ=255) gCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGtt < 2:207455/150‑1 (MQ=255) tGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg > 1:490947/1‑150 (MQ=255) tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTGAGCGGGCAGAGCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGgccg > 1:569306/1‑150 (MQ=255) tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg > 2:312479/1‑147 (MQ=255) tGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTgg < 1:312479/147‑1 (MQ=255) aaaGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCa > 1:276527/1‑127 (MQ=255) aaaGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCa < 2:276527/127‑1 (MQ=255) ggtCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTAGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGAGCGACCAGTTCATTTCCAGCGAGCTGGTGCAGTTGGCCGCCATGGa > 2:518977/3‑150 (MQ=255) gACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGaa > 1:578799/1‑150 (MQ=255) cAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAAc < 2:725537/150‑1 (MQ=255) aaCTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACa > 2:1098982/1‑150 (MQ=255) ccGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAg < 2:881486/150‑1 (MQ=255) aTACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAAGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGc > 2:862171/1‑150 (MQ=255) tACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCa > 2:467466/1‑150 (MQ=255) aCAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCaa > 2:853043/1‑150 (MQ=255) tACCGGCGACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtctagctctttcaccagcccctggcgcaggccattgatgtcgaagcctacctgcatcagcagcggtttgatggagccgccc < 2:1055676‑M2/150‑119 (MQ=255) tACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAgctgctgct > 1:325387/1‑150 (MQ=255) tACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAgctgctgct > 1:77641/1‑150 (MQ=255) gACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtcgagctctttcaccagcccctggcgcaggccattgatgt < 1:709175‑M2/102‑78 (MQ=255) gACGTGAACATGTCGCAGGACTTGGcacgtcgccggtagggttctgtattttcggcagttggtcgagctctttcaccagcccctggcgcaggccattgatgt > 2:709175‑M2/1‑25 (MQ=255) aCGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAgg < 2:992120/150‑1 (MQ=255) gTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGc < 1:1021864/150‑1 (MQ=255) tGccaagtcctgcgacatgttcacgtcgccggtagggttctgtattttcggcagttggtcgagctctttcaccagaccctggcgcaggccattgatgtcgaagcctacctgcatcagcagcggtttgatggagccgccctgctgttcgag < 1:64029‑M1/150‑149 (MQ=255) tGAACATGTCGCAGGACTTGGCACGTCTGCTTCGCGAGGCAGACAGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTAGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCg > 1:820326/1‑150 (MQ=255) | GTGCACCTGTTACAGGCGCTGCTCGAACAGCAGGGCGGCTCCATCAAACCGCTGCTGATGCAGGTAGGCTTCGACATCAATGGCCTGCGCCAGGGGCTGGTGAAAGAGCTCGACCAACTGCCGAAAATACAGAACCCTACCGGCGACGTGAACATGTCGCAGGACTTGGCACGTCTGCTTAACCAGGCAGACCGCCTGGCACAGCAGAAGGGCGACCAGTTCATTTCCAGCGAGCTGGTGCTGTTGGCCGCCATGGACGAAAACAGCAAGCTCGGCAAGCTGCTGCTGAGCCAGGGCG > NC_002947/730557‑730854 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |