| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1954184 | 43 (0.990) | 3 (0.070) | 3/246 | NT | 6.0% | coding (465/1494 nt) | PP_1752 | hypothetical protein |
| ? | NC_002947 | = 1954219 | 52 (1.240) | coding (500/1494 nt) | PP_1752 | hypothetical protein | |||||
GGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCACCAGCCGTGACT > NC_002947/1954042‑1954332 | ggTACAGCAAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGc > 1:418697/1‑150 (MQ=255) gTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGACGGGTTTGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCa > 1:912050/1‑150 (MQ=255) tACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAg < 2:391411/150‑1 (MQ=255) cAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGAt > 2:881236/1‑150 (MQ=255) gctgcAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACg < 2:1093749/150‑1 (MQ=255) ggggCGGGTGCACGGGGTGTTCAAGGATGCCGTGCGCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCGGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGaa > 2:247680/1‑150 (MQ=255) gggCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGaaa < 1:881236/150‑1 (MQ=255) ggagggggTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGGGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCaa < 2:43949/146‑1 (MQ=255) gCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCaa < 2:756220/150‑1 (MQ=255) aCGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCGATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGAACAAGAAGAACAGGTTTCACCTGTGCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAgg < 2:30811‑M2/150‑3 (MQ=255) aCGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAgg < 1:15834‑M2/150‑3 (MQ=255) gggggtGTTCATGGATGCCGTGCTCGCTCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAGCTTCTGGTTCCACCTGTCCAAGACGCAGATGAAGGCACGGCTGAAATCGCTCAAgga > 2:418697‑M2/2‑147 (MQ=255) cGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAgga < 2:385224‑M2/150‑4 (MQ=255) ggggTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGc < 1:13170/118‑1 (MQ=255) ggggTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGc > 2:13170/1‑118 (MQ=255) ttCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCg < 1:795153/150‑1 (MQ=255) aaGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCttgagcgatttcagccgtgccttcatctgcttcttgggcaggtggaac < 2:773592‑M1/150‑49 (MQ=255) cGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTg > 2:433362/1‑150 (MQ=255) gTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGaaa > 2:654599/1‑120 (MQ=255) gTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGaaa < 1:654599/120‑1 (MQ=255) tGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGa > 1:129815/1‑150 (MQ=255) gCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGCCCCGCTGCACCGCTGGaa < 2:912050/150‑1 (MQ=255) gATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATc > 2:633278/1‑150 (MQ=255) aTCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCa < 2:815118/150‑1 (MQ=255) aGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGcc > 1:147943/1‑150 (MQ=255) cGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCaagaa < 2:176197/78‑1 (MQ=255) cGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCaagaa > 1:176197/1‑78 (MQ=255) ggTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTgg > 2:782962/1‑150 (MQ=255) gTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGgc > 2:129940/1‑150 (MQ=255) ggaggaGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAAc < 1:395308/150‑1 (MQ=255) tGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGAcc < 2:147943/150‑1 (MQ=255) gCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCttgagcgatttcagccgtgccttcatctgcttcttggacaggtggaa < 1:522362‑M1/96‑48 (MQ=255) gCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCttgagcgatttcagccgtgccttcatctgcttcttggacaggtggaa > 2:522362‑M1/1‑49 (MQ=255) tgtgCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCCAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGACAGCAGTCGCAAACCTACGACCGtt > 2:235924/1‑150 (MQ=255) tgtgCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGtt > 2:753766/1‑150 (MQ=255) tgtgCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGtt < 1:753766/150‑1 (MQ=255) tgCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTc < 1:956298/150‑1 (MQ=255) gTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGa < 1:51249/60‑1 (MQ=255) gTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGa > 2:51249/1‑60 (MQ=255) atcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGtg < 1:782962/150‑1 (MQ=255) atcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGtg > 2:983067/1‑150 (MQ=255) tcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCAGAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTgc < 2:576846/132‑1 (MQ=255) tcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTgc > 1:576846/1‑132 (MQ=255) tcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGtgc > 2:498224/1‑150 (MQ=255) tcaAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGtgc > 1:890458/1‑150 (MQ=255) aGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGtgctgc > 2:660170/1‑150 (MQ=255) ttCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTgcgc < 2:438469/150‑1 (MQ=255) gTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCAc > 1:297972/1‑150 (MQ=255) gTTCCACCTGCCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAggacaggtggaaccagaacttgatgatcagcgcaccttcatcgcacagcatctcctccaggcgttcggcaccggtaatggcctgatcgagcacggcatcctt < 2:773592‑M2/150‑103 (MQ=255) ttCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAggacaggtggaaccagaacttgatgatcagcgcaccttcatcgcacagc > 2:522362‑M2/1‑47 (MQ=255) ttCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAggacaggtggaaccagaacttgatgatcagcgcaccttcatcgcacagc < 1:522362‑M2/96‑50 (MQ=255) ttCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCAcc > 2:972895/1‑150 (MQ=255) aCCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCACCAGcc > 2:150724/1‑150 (MQ=255) aCCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACATCCGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCACCAGcc > 1:674635/1‑150 (MQ=255) cTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCACCAGCCGt < 1:129940/150‑1 (MQ=255) gTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCAGCACCAGCCGTgc < 2:15834/150‑2 (MQ=255) tCCttgagcgatttcagccgtgccttcatctgcttcttggacaggtggaaccagaacttgatgatcagcgcaccttcatcgcacagcatctcctccaggcgttcggcaccggtaatggcctgatcgagcacggcatccttgaacaccccg < 2:385224‑M1/150‑148 (MQ=255) tCCttgagcgatttcagccgtgccttcatctgcgtcttggacaggtggaaccagaagctgatgatcagcgcaccttcatcgcacagcatctcctccaggcgttcggcaccggtaatggcctgagcgagcacggcatccatgaacaccccc > 2:418697‑M1/1‑3 (MQ=255) ccttgagcgatttcagccgtgccttcatctgcttcttggacaggtggaaccagaacttgatgatcagcgcaccttcatcgcacagcatctcctccaggcgttcggcaccggtaatggcctgatcgagcacggcatccttgaacaccccgt < 1:15834‑M1/150‑149 (MQ=255) ccttgagcgatttcagccgtgccttcatctgcttcttgcacaggtgaaacctgttcttcttgttcagcgcaccttcatcgcacagcatctcctccaggcgttcggcaccggtaatcgcctgatcgagcacggcatccttgaacaccccgt < 2:30811‑M1/150‑149 (MQ=255) cAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGcgccg > 2:1013766/1‑135 (MQ=255) cAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGcgccg < 1:1013766/135‑1 (MQ=255) | GGTACAGCCAGATGCTGCAGGGGCGGGTGCACGGGGTGTTCAAGGATGCCGTGCTCGATCAGGCCATTACCGGTGCCGAACGCCTGGAGGAGATGCTGTGCGATGAAGGTGCGCTGATCATCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAGGCACGGCTGAAATCGCTCAAGGACGACCCGCTGCACAGCTGGAAGATCAGCCCGCTGGATTGGCAGCAGTCGCAAACCTACGACCGTTTCGTGCGCTTTGGCGAGCGCGTGCTGCGCCGCACCAGCCGTGACT > NC_002947/1954042‑1954332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |