New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3150122	36 (0.830)	4 (0.100)	4/234	NT	9.9%	coding (183/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein
	?	NC_002947	= 3150141	40 (1.000)					coding (202/1131 nt)	PP_2766	long‑chain‑fatty acid‑‑CoA ligase‑like protein

GCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGT  >  NC_002947/3149978‑3150269                                                                                                                                                 |                                                                                                                                                    gCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAg                                                                                                                                                >  2:1057770/1‑150 (MQ=255)  cTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGc                                                                                                                                               <  1:568867/150‑1 (MQ=255)           gCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATc                                                                                                                                      <  2:452451/150‑1 (MQ=255)              caTCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTc                                                                                                                                   >  1:111153/1‑150 (MQ=255)               aTCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCa                                                                                                                                  >  1:1069594/1‑150 (MQ=255)               aTCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGACCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTcc                                                                                                                                  >  2:320776/1‑149 (MQ=255)                  aaCGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgcc                                                                                                                               <  1:172038‑M2/150‑4 (MQ=255)                               cgttgcgtggCGCCACAAGCTTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGcccgca                                                                                                                  <  1:38465/150‑4 (MQ=255)                                          gcCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTgg                                                                                                       <  2:635973/150‑1 (MQ=255)                                           ccACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGc                                                                                                      >  2:862142/1‑150 (MQ=255)                                            cacaAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGCCAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCa                                                                                                     >  1:965906/1‑150 (MQ=255)                                                    tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                             >  2:873774/1‑150 (MQ=255)                                                    tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                             >  1:725592/1‑150 (MQ=255)                                                    tCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggc                                                                                             <  2:713367/150‑1 (MQ=255)                                                      tAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTggcgg                                                                                           >  2:776707/1‑150 (MQ=255)                                                          ccTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCa                                                                                       >  2:604453/1‑150 (MQ=255)                                                          ccTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCa                                                                                       <  1:943056/150‑1 (MQ=255)                                                            tgtgGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTCTGTAGCAGGCTGCGCGTGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGt                                                                                     <  1:806680/150‑1 (MQ=255)                                                             gtgGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTg                                                                                    <  2:725592/150‑1 (MQ=255)                                                                       cgcAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGggcggc                                                                          <  1:95522/150‑1 (MQ=255)                                                                           gcagggCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTcg                                                                      >  1:770874/4‑150 (MQ=255)                                                                                gcgcAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCtgacgatcagcaggctgtcgccggc                                                                                                                            >  2:994228‑M1/1‑66 (MQ=255)                                                                                gcgcAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCtgacgatcagcaggctgtcgccggc                                                                                                                            <  1:994228‑M1/91‑26 (MQ=255)                                                                                  gcAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACt                                                               >  1:152165/1‑150 (MQ=255)                                                                                    aaCTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGc                                                             >  2:662597/1‑150 (MQ=255)                                                                                       tgctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCtgacgatcagcaggctgtcgccggccgcgaagccgg                                                                                                                 >  2:652773‑M1/1‑59 (MQ=255)                                                                                       tgctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCtgacgatcagcaggctgtcgccggccgcgaagccgg                                                                                                                 <  1:652773‑M1/95‑37 (MQ=255)                                                                                       tgctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCg                                                          >  1:415303/1‑150 (MQ=255)                                                                                         ctgGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGAt                                                        >  2:1100827/1‑150 (MQ=255)                                                                                            gCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGGCGCGGCACTGCTCGATCCg                                                     >  1:649910/1‑150 (MQ=255)                                                                                            agcccggTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGAGAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGCCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCg                                                     >  2:585883/6‑150 (MQ=255)                                                                                             ccGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGc                                                    <  1:1100827/150‑1 (MQ=255)                                                                                             ccGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGc                                                    <  1:1057770/150‑1 (MQ=255)                                                                                              cGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGgcggcg                                                                                         >  1:1063427/1‑112 (MQ=255)                                                                                              cGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGgcggcg                                                                                         <  2:1063427/112‑1 (MQ=255)                                                                                                           cTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGAcgcg                                      <  1:873774/150‑1 (MQ=255)                                                                                                             ggCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGa                                    <  1:604453/150‑1 (MQ=255)                                                                                                                      gCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGAc                           >  2:139877/1‑150 (MQ=255)                                                                                                                                gCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGt                 >  1:643381/1‑150 (MQ=255)                                                                                                                                 ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagca                                                                       >  2:652773‑M2/1‑36 (MQ=255)                                                                                                                                 ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagca                                                                       <  1:652773‑M2/95‑60 (MQ=255)                                                                                                                                 ccGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTg                <  2:319680/150‑1 (MQ=255)                                                                                                                                  cGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGa               >  2:1078056/1‑150 (MQ=255)                                                                                                                                   ggCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGaa              <  2:415303/150‑1 (MQ=255)                                                                                                                                            gccggcGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagcagttgcgc                                                                >  2:994228‑M2/1‑25 (MQ=255)                                                                                                                                            gccggcGACAGCCTGCTGATCGTCAgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagcagttgcgc                                                                <  1:994228‑M2/91‑67 (MQ=255)                                                                                                                                              cggcGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCgg   <  2:111153/150‑1 (MQ=255)                                                                                                                                               ggctgacgatcagcaggctgtcgccggccgcgaagccggcctcgcgcagcccggtggccaggctctgcacctcggccagcagttgcgcccagctgcgcgcctgccacaggcctagacgcttgtggcgcaacgcaacgtccgccccacgtt  <  1:172038‑M1/150‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGACAGCCTGCTGATCGTCAGCCGGCCGCGCCCTGAGGCGCTGCTGGCAAGCCTGGCGGCGCAGTGGCTGGGCGGCGTCGCGGCACTGCTCGATCCGCTGATGCCCGACGCGGAGCAACTGACGCTGTTGCGTGAACTGCAGGCCGGT  >  NC_002947/3149978‑3150269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.