New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4590136 | 40 (0.920) | 4 (0.100) | 4/242 | NT | 9.1% | coding (772/1608 nt) | mccB | methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta |
? | NC_002947 | = 4590151 | 42 (1.020) | coding (787/1608 nt) | mccB | methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta |
ACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGTTCGACGTGCGCGAGGTGATC > NC_002947/4589992‑4590285 | aCCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATcgc‑g > 1:373328/1‑150 (MQ=255) cTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCAGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACg > 1:307040/1‑150 (MQ=255) ttCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGCCGAACACGCCCTGGCCATCGC‑GCG‑ACGc > 2:815647/1‑150 (MQ=255) tCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAgtg > 1:103555/1‑150 (MQ=255) cGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGt > 1:498194‑M2/1‑149 (MQ=255) gccgccACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAg > 2:416477/1‑150 (MQ=255) cgccACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCt > 2:849250/1‑150 (MQ=255) ccACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCg < 2:858159/150‑1 (MQ=255) aCCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGc < 1:849250/150‑1 (MQ=255) ggCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCAcactgcgtcgcgcgatggccagggcgtgttcgtc > 2:833167‑M1/1‑103 (MQ=255) ggCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCA‑CACTGCG‑TCGC‑GCGatggccagggcgtgttcgtc > 1:833167‑M2/1‑117 (MQ=255) aGTGGTGAGCGCCGAAGGCCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCa < 1:844268/150‑1 (MQ=255) tggtgAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCAGCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGc > 2:33578/1‑150 (MQ=255) ggtgAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCg > 1:105080/1‑150 (MQ=255) gAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGtt < 1:258795/150‑1 (MQ=255) aGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTg > 1:603426/1‑150 (MQ=255) aGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGt < 1:1124844/150‑1 (MQ=255) gACCTCGGCGGCGCGGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCACACTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTg < 1:527717/150‑1 (MQ=255) ccTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGc > 2:171334/1‑150 (MQ=255) cTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa < 1:330158/150‑1 (MQ=255) cTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCa > 1:174807/1‑150 (MQ=255) tCGGCGGCGCTGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCAc < 2:1107348/150‑1 (MQ=255) tCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCa > 2:537879/1‑140 (MQ=255) tCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCa < 1:537879/140‑1 (MQ=255) tCGGCGGCGCAGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCAATAA‑GAGTTCGTTG‑CTTTCAAATTGCAACTTTCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCAc > 1:130966/1‑150 (MQ=255) cggcggCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCAcc > 2:221823/1‑150 (MQ=255) gcgcCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCttt < 1:194566/150‑1 (MQ=255) cgcCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTa < 2:892872/150‑1 (MQ=255) cGATGTGCGTTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCAcactgcgtcgcgcgatggccaggg > 1:572642‑M1/1‑68 (MQ=255) cGATGTGCGTTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCAcactgcgtcgcgcgatggccaggg < 2:572642‑M1/92‑25 (MQ=255) tgtgCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGc < 1:221823/150‑1 (MQ=255) aTTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATg > 2:1120086/1‑150 (MQ=255) ttGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGa > 2:929167/1‑150 (MQ=255) gCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGt < 1:666807/150‑1 (MQ=255) ggtgcggcgTCGCCGACCATTATGCCGACAACGACGAACACGCGCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGc > 1:258432/4‑126 (MQ=255) ggtgcggcgTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGc < 2:258432/123‑1 (MQ=255) aGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCg < 2:230076/132‑1 (MQ=255) aGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCg > 1:230076/1‑132 (MQ=255) tGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCaa < 1:416477/150‑1 (MQ=255) gCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCCCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGCTGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAg > 2:155734/1‑150 (MQ=255) cGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCa > 2:1011713/1‑150 (MQ=255) cAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAAcc < 2:130966/150‑1 (MQ=255) cgacgaACACGCCCTGGCCAGCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGtt < 2:103555/150‑1 (MQ=255) gacgaACACGCCCTGGCCAtcgcgcgacgcagtgtggccagggcgtgttcgtcgttgtcggcataatggtcggcgacgccgctggtgcggcaatgcacatcggcgccgccgaggtcttcggcgctcaccacttcgcc > 1:833167‑M1/1‑19 (MQ=255) gacgaACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGtggccagggcgtgttcgtcgttgtcggcataatggtcggcgacgccgctggtgcggcaatgcacatcggcgccgccgaggtcttcggcgctcaccacttcgcc > 2:833167‑M2/1‑34 (MQ=255) cgaACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGc < 1:1037090/129‑1 (MQ=255) cgaACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGc > 2:1037090/1‑129 (MQ=255) gaccacGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGTTCGAc < 2:307394/147‑1 (MQ=255) cccTGGCCATCGC‑GCG‑ACGCAGTGtggccagggcgtgttcgtcgttgtcggcataatggtcggcgacgccgctggtgcggcaacgcacatcg < 2:572642‑M2/92‑69 (MQ=255) cccTGGCCATCGC‑GCG‑ACGCAGTGtggccagggcgtgttcgtcgttgtcggcataatggtcggcgacgccgctggtgcggcaacgcacatcg > 1:572642‑M2/1‑24 (MQ=255) cATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGTTCGACGTGCGCGAGGTGAt > 1:168746/1‑150 (MQ=255) acactgcgtcgcgcgatggccagggcgtgttcgtcgttgtcggcataatggtcggcgacgccgctggtgcggcaatgcacatcggcgccgccgaggtcttcggcgctcaccacttcgccggtggcggctttcaccagcggcgggccggcg > 1:498194‑M1/1‑1 (MQ=255) aTCGC‑GCG‑ACGCAGTGGGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGTTCGACGTGCGCGAGGTGATc < 1:1042657/150‑1 (MQ=255) | ACCATCTTCCTCGCCGGCCCGCCGCTGGTGAAAGCCGCCACCGGCGAAGTGGTGAGCGCCGAAGACCTCGGCGGCGCCGATGTGCATTGCCGCACCAGCGGCGTCGCCGACCATTATGCCGACAACGACGAACACGCCCTGGCCATCGC‑GCG‑ACGCAGTGTGGCCAACCTCAACTGGCACAAGCTCGGCAAGCTGCAGCGGTTGGCACCAGTGGCACCGCTTTATGCGGCCGATGAGCTGTACGGCGTGGTTCCGGCCGATGCCAAGCAACCGTTCGACGTGCGCGAGGTGATC > NC_002947/4589992‑4590285 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |