New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4793233 =	48 (1.110)	3 (0.070)	3/244	NT	6.5%	coding (652/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4793269 =	40 (0.960)					coding (616/6525 nt)	pvdI	non‑ribosomal peptide synthetase

CGCCGGACGCAGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCA  >  NC_002947/4793093‑4793382                                                                                                                                             |                                                                                                                                                      cgcCGGACGCAGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAgcgg                                                                                                                                              <  2:248480/150‑1 (MQ=255)  gcCGGACGCAGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAgcggc                                                                                                                                             <  1:71631/150‑1 (MQ=255)         gCAGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTg                                                                                                                                      <  1:693902/150‑1 (MQ=255)           aGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGCTCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCt                                                                                                                                    <  1:248713/150‑1 (MQ=255)           aGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCt                                                                                                                                    >  1:913870/1‑150 (MQ=255)            ggTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTg                                                                                                                                   >  1:253560/1‑150 (MQ=255)             gTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGa                                                                                                                                  <  2:750153/150‑1 (MQ=255)                aTCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGc                                                                                                                               <  1:472616/150‑1 (MQ=255)                  cGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCt                                                                                                                             <  1:318508/150‑1 (MQ=255)                   gCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGGGGCGCAAGTGCTGACGCCTg                                                                                                                            >  2:528929/1‑150 (MQ=255)                   gCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTg                                                                                                                            <  1:1079633/150‑1 (MQ=255)                   gCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTg                                                                                                                            <  1:829643/150‑1 (MQ=255)                     tCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTggc                                                                                                                          >  1:173261/1‑150 (MQ=255)                                aaCACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCAcggcg                                                                                                               <  1:585811/150‑1 (MQ=255)                                 acacGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCAcggcgg                                                                                                              <  2:173913/150‑1 (MQ=255)                                    cGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCAt                                                                                                           <  1:423143/150‑1 (MQ=255)                                      gccaccgagcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCg                                                                                                         >  2:272506‑M1/104‑150 (MQ=255)                                          ggtCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTaaa                                                                                                     <  1:189431/150‑1 (MQ=255)                                           gtCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAg                                                                                                    >  2:723857/1‑150 (MQ=255)                                           cgagcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAg                                                                                                    <  2:971720‑M1/52‑1 (MQ=255)                                             agcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGcc                                                                                                  >  1:971720‑M1/97‑150 (MQ=255)                                                 gCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACCGGGCGAAATCGCCATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAAc                                                                                              <  2:479084/150‑1 (MQ=255)                                                 gCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAAc                                                                                              <  2:253560/150‑1 (MQ=255)                                                  cccAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCaa                                                                                                                                         <  2:808875/106‑1 (MQ=255)                                                  cccAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCaa                                                                                                                                         >  1:808875/1‑106 (MQ=255)                                                   ccAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCaa                                                                                                                                         >  1:818662/1‑105 (MQ=255)                                                   ccAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCaa                                                                                                                                         <  2:818662/105‑1 (MQ=255)                                                       atgatCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTtc                                                                                        >  2:754946/1‑150 (MQ=255)                                                          atCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTtcgtc                                                                                     <  2:913870/150‑1 (MQ=255)                                                                         cAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAg                                                                      >  2:547628/1‑150 (MQ=255)                                                                          aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATc                                                                                 >  1:961882/1‑138 (MQ=255)                                                                          aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATc                                                                                 <  2:961882/138‑1 (MQ=255)                                                                          aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGc                                                                     <  1:705947/150‑1 (MQ=255)                                                                                   gcCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCg                                                            >  2:808190/1‑150 (MQ=255)                                                                                   gcCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCg                                                            >  2:808194/1‑150 (MQ=255)                                                                                          cGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCga                                                     <  2:173261/150‑1 (MQ=255)                                                                                           gCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCgat                                                    <  1:401586/150‑1 (MQ=255)                                                                                            ccGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCgatg                                                   >  2:1057768/1‑150 (MQ=255)                                                                                                 ttCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCAAGGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACACAGCGACCAGCCGTCGGCGATGATATg                                              >  1:20109/1‑150 (MQ=255)                                                                                                   ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCg                                                      <  1:735874/140‑1 (MQ=255)                                                                                                   ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCg                                                      >  2:735874/1‑140 (MQ=255)                                                                                                   ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGt                                            <  1:856028/150‑1 (MQ=255)                                                                                                     agccagcTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGc                                          >  1:809670/1‑150 (MQ=255)                                                                                                              cgctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATc                                 <  1:754946/150‑1 (MQ=255)                                                                                                               gctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGACGACGGCGATGATATGGTGCAGAGTGATCa                                >  1:503005/1‑150 (MQ=255)                                                                                                                ctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAg                               <  1:723857/150‑1 (MQ=255)                                                                                                                       aGGGCGAAATCGCGATACTGGATGGCCAGCAGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAgg                        >  2:655177/1‑150 (MQ=255)                                                                                                                               aTCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCaga                                       >  2:281419/1‑127 (MQ=255)                                                                                                                               aTCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCaga                                       <  1:281419/127‑1 (MQ=255)                                                                                                                                tCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTg               <  1:1057768/150‑1 (MQ=255)                                                                                                                                      tACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAg         <  2:809670/150‑1 (MQ=255)                                                                                                                                            aTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTgcgc   <  1:547628/150‑1 (MQ=255)                                                                                                                                             TGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCgca  >  1:528929‑M1/1‑150 (MQ=255)                                                                                                                                             |                                                                                                                                                      CGCCGGACGCAGGTGATCGCTCGGCAATTGCAACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCA  >  NC_002947/4793093‑4793382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.