New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5046227 = | 32 (0.740) | 3 (0.070) | 3/242 | NT | 8.2% | coding (137/627 nt) | PP_4450 | phosphoglycerate mutase family protein |
? | NC_002947 | 5046271 = | 37 (0.900) | coding (181/627 nt) | PP_4450 | phosphoglycerate mutase family protein |
CGATAGTCGATGAAACGAATAAAGCTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAG > NC_002947/5046082‑5046373 | cGATAGTCGATGAAACGAATAAAGCTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCt > 2:1093724/1‑150 (MQ=255) tctcgcccaatacgcatccacccaatcccgtcgttgagcgactgtggtatcgacgcaacgcgcgggtgcgaggtaagtgaactcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTg < 1:925597‑M1/6‑1 (MQ=255) ccaatacgcatccacccaatcccgtcgttgagcgactgtggtatcgacgcaacgcgcgggtgcgaggtaagtgaactcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTg > 2:734084‑M1/139‑144 (MQ=255) ccaatacgcatccacccaatcccgtcgttgagcgactgtggtatcgacgcaacgcgcgggtgcgaggtaagtgaactcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTg < 1:734084‑M1/6‑1 (MQ=255) aaCGAATAAAGCTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTgg < 2:483109/150‑1 (MQ=255) aCGAATAAAGCTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGc > 1:735369/1‑150 (MQ=255) aaTAAAGGTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTc < 2:530811/150‑1 (MQ=255) cTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTtc < 1:489323/150‑1 (MQ=255) tCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGc > 2:569720/1‑150 (MQ=255) cGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCa < 2:837445/150‑1 (MQ=255) ggCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAg < 1:1093724/150‑1 (MQ=255) ggCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGCGCCCAg < 1:107241/150‑1 (MQ=255) cGAGAGTGCTGCCAACGCAGGCCAGCCGAGTCGAAATCATGAAAGCATCCCTTTGACCAATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGc < 2:17252/150‑1 (MQ=255) agagTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTTATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGa < 1:600579/150‑1 (MQ=255) tgtggtatcgacgcaacgcgcgggtgcgaggtaagtgaactcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAg > 1:1088105‑M1/103‑150 (MQ=255) cAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCCCCTTTCTCACGGGCCCAGGCGACAGCACAGga < 1:752650/150‑1 (MQ=255) cAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGga < 1:437357/150‑1 (MQ=255) gcGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGACGACCGCAAAGGCGATAACCGCCCTc > 2:904956/1‑150 (MQ=255) gAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTc < 1:188656/146‑1 (MQ=255) gAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTc > 2:188656/1‑146 (MQ=255) aTCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGa > 2:221424/1‑79 (MQ=255) aTCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGa < 1:221424/79‑1 (MQ=255) aTGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTgg < 1:701933/150‑1 (MQ=255) tcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAgg < 1:517924‑M1/42‑1 (MQ=255) tcttggattggccatgtctcaatcgccacggtggggaagatggcggatgtctcctgtgctgtCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAgg > 2:517924‑M1/63‑104 (MQ=255) cATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTga < 2:735369/150‑1 (MQ=255) aTCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTgag > 1:856201/1‑150 (MQ=255) tGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGATAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGc < 2:1017756/150‑1 (MQ=255) aCCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCa > 2:80012/1‑150 (MQ=255) ccATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAAt > 2:105385/1‑150 (MQ=255) ccATCGAGGACTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTgaga > 1:818810/1‑140 (MQ=255) ccATCGAGGACTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTgaga < 2:818810/140‑1 (MQ=255) cGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCTTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGCCATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCaa < 2:573445/150‑1 (MQ=255) gAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTGTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAag > 2:955442/1‑150 (MQ=255) aGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAaga < 1:882177/150‑1 (MQ=255) tCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCa > 2:755977/1‑150 (MQ=255) tCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCAc > 2:104350/1‑150 (MQ=255) cAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGtt > 2:757811/1‑150 (MQ=255) tttCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGa < 1:105385/150‑1 (MQ=255) aaGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAg < 1:904956/150‑1 (MQ=255) aaGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGAGCGTTGCGTCGCTACCACAg < 2:856201/150‑1 (MQ=255) | CGATAGTCGATGAAACGAATAAAGCTGGTTCGTCACGGCGAGAGTGCTGCCAACGCAGGCCAGGCGAGTCGAAATCATGAAAGCATCCCTTTGACCCATCGAGGGCTCGAGCAGGCAATCACCGTGGCAAGGTCTTTCACTAAAGCGCCTGAGCTCATCGTGGCTTCACCTTTCTCACGGGCCCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAG > NC_002947/5046082‑5046373 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |