New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5437823 = | 40 (0.920) | 4 (0.100) | 4/244 | NT | 9.7% | noncoding (123/254 nt) | PP_mr57 | P24 ncRNA |
? | NC_002947 | 5437849 = | 36 (0.870) | noncoding (97/254 nt) | PP_mr57 | P24 ncRNA |
AAATTCCCGACATGAAAAAAGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACTTGCGCAATTTTTCACCCTGGATTGATAAT > NC_002947/5437675‑5437969 | ttgccttttctgttcggattgctgcgaattatcaatccagggtgaaaaattgcgcaagtgctatttatctgagcaatcttcgcaatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGc > 1:736528‑M1/149‑150 (MQ=255) aaaaaGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAgg > 1:271108/1‑150 (MQ=255) aaaaGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAggg < 2:638868/150‑1 (MQ=255) aaaaGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCACGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGACGcgccctaggcgg > 1:665792/1‑143 (MQ=255) aaaaGGGAGACCACAGGGCCTCACTCCAAGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAggg > 1:151276/1‑150 (MQ=255) aaGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGgcg < 1:582963/150‑1 (MQ=255) ggAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACAACGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGt > 2:282008/1‑150 (MQ=255) cTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGAt < 1:1089778/150‑1 (MQ=255) cTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGAt > 2:1089778/1‑150 (MQ=255) ccTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGgc > 1:34918/1‑129 (MQ=255) ccTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGgc < 2:34918/129‑1 (MQ=255) ccTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTc > 2:82419/1‑150 (MQ=255) tgcAGGAATTGTCGCCCGTGCTCGGCACTTGTGGCGCCGGCTCACTTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCg < 2:352373/148‑1 (MQ=255) tCATGAATTGTCCTCCGTTCTCTGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGCGCCTGCAGATCCTGTGGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCgg < 2:527188/150‑1 (MQ=255) tCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCgg < 1:373851/150‑1 (MQ=255) aaaTTGTCGTCCGTGCTCGGCACTTGTGCCGACGACTCAGCTCCTCCCCTAATCGTGATGGAGTTTAGCCCGGGGGCCTGCAGATCCTGTTAGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAg < 2:578343/149‑1 (MQ=255) tcgtcCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACTGTCTTATGGAAGGAGAAAGATCGGGGGGAGTGCAGATCCTGATGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTc > 2:151415/1‑150 (MQ=255) gtcCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACCCACTCGTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTg < 1:851364/150‑1 (MQ=255) gtcCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACt < 2:42970/129‑1 (MQ=255) gtcCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACt > 1:42970/1‑129 (MQ=255) ccGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACAACGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGt < 1:282008/150‑1 (MQ=255) tCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATaaa < 2:271108/150‑1 (MQ=255) atctgagcaatcttcgcaatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGa < 1:1080369‑M1/32‑1 (MQ=255) atctgagcaatcttcgcaatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGa > 2:1080369‑M1/83‑114 (MQ=255) ggCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACg < 2:733152/150‑1 (MQ=255) caatcttcgcaatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGt < 1:371403‑M1/29‑1 (MQ=255) caatcttcgcaatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGt > 2:371403‑M1/76‑104 (MQ=255) cgcCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACggg < 2:139911/150‑1 (MQ=255) gcCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGt > 1:818649/1‑150 (MQ=255) cGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAg < 1:836803/118‑1 (MQ=255) cGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAg > 2:836803/1‑118 (MQ=255) cacctcacACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACa > 2:867306/1‑150 (MQ=255) aatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAc < 2:446771‑M1/5‑1 (MQ=255) aatcctctgtcgcaacccgtccggtatctttatcaccagaatcactgcccggacatcagtccacgGCGAc > 1:446771‑M1/66‑70 (MQ=255) ctcacACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACagag > 2:19773/1‑150 (MQ=255) ttctGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCCCGAC‑CGCCCGCCTAGGGGGCGTGGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGa > 1:981504/1‑150 (MQ=255) gtgtgtAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGa > 1:807127/1‑150 (MQ=255) gCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGc < 1:700574/129‑1 (MQ=255) gCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGc > 2:700574/1‑129 (MQ=255) ccGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGAGCTTGTCCGTGGACTGATGTCTGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGGTAAATAGCa < 2:151276/150‑1 (MQ=255) cGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCAc > 1:676441/1‑150 (MQ=255) cGGGGGCCTGCAGATCCTGTTGGATGGCCGCCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGCCAGAGGATTGCGAAGATTGCTCAGATAAATAGCAc < 2:594012/150‑1 (MQ=255) ggggCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACtt > 1:387913/1‑150 (MQ=255) tGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACtt < 1:566977/135‑1 (MQ=255) tGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACtt > 2:566977/1‑135 (MQ=255) ttGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACTTGCGCAATTTTTCACCCt < 2:807127/150‑1 (MQ=255) gccggccgCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACTTGCGCAATTTTTCACCCTGGATTGa < 1:583269/150‑1 (MQ=255) gccgCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACTTGCGCAATTTTTCACCCTGGATTGATAAt > 1:105702/1‑150 (MQ=255) | AAATTCCCGACATGAAAAAAGGGAGACCACAGGGCCTCCCTTCAGGAATTGTCGTCCGTGCTCGGCACTTGTGGCGCCGGCTCACCTCACACCGTCTTCTGGAGGGTGTGTAGCCCGGGGGCCTGCAGATCCTGTTGGATGGCCGGCCGCGAC‑CGCCCGCCTAGGGCGCGTCGCCGTGGACTGATGTCCGGGCAGTGATTCTGGTGATAAAGATACCGGACGGGTTGCGACAGAGGATTGCGAAGATTGCTCAGATAAATAGCACTTGCGCAATTTTTCACCCTGGATTGATAAT > NC_002947/5437675‑5437969 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |