New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5692795	53 (1.220)	5 (0.120)	5/244	NT	8.8%	coding (39/570 nt)	PP_4995	exopolysaccharide biosynthesis protein
	?	NC_002947	= 5692824	53 (1.270)					coding (68/570 nt)	PP_4995	exopolysaccharide biosynthesis protein

GCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGCAACTGCGC  >  NC_002947/5692647‑5692939                                                                                                                                                      |                                                                                                                                                 gcTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑cc                                                                                                                                                 <  2:164099/150‑1 (MQ=255)  cTGAAGCCTGTGGAGTATCGGCGGGAGCGGGAATGCCCGCGACAGTTAATAAAAATGCTACTCAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCt                                                                                                                                                <  1:1097906/150‑1 (MQ=255)           gtgGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCAt                                                                                                                                       <  1:55761/150‑1 (MQ=255)                  gtCGGCGGTCGCCGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAACGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCAGGCCGcac                                                                                                                                <  1:500230/149‑1 (MQ=255)                      gcggGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATgg                                                                                                                            >  2:723381/1‑150 (MQ=255)                      cccttcgCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATgg                                                                                                                            >  1:545878/7‑150 (MQ=255)                       cggGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGc                                                                                                                           <  2:457340/150‑1 (MQ=255)                       cggGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGc                                                                                                                           <  2:1115877/150‑1 (MQ=255)                            gCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATc                                                                                                                      <  1:723572/150‑1 (MQ=255)                            gCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATc                                                                                                                      <  2:1056797/150‑1 (MQ=255)                              gggCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCCCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCtgatcggccatgtgcggcatggcgatcag                                                                                                                     <  1:921935‑M1/150‑30 (MQ=255)                                    gCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑Cggatcggccatgtgcggcatggcgatcaggaactgg                                                                                                              <  2:1097527‑M1/150‑37 (MQ=255)                                       cgcgAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGcc                                                                                                           >  2:723109/1‑150 (MQ=255)                                          gAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAg                                                                                                        >  2:778428/1‑150 (MQ=255)                                           aaGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGa                                                                                                       <  2:863552/150‑1 (MQ=255)                                               ggCTGGCAGAACCGAGAGAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTTCCtgatcgccatgtgcggcatggcgatcaggaactggtgcttgaggta                                                                                                    <  2:62105‑M1/150‑47 (MQ=255)                                                 cTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCa                                                                                                 >  1:786490/1‑150 (MQ=255)                                                  tGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCTTTCTGCGCCCAGACCCTCAc                                                                                                <  2:943730/150‑1 (MQ=255)                                                            gACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATG‑AAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATAtcgtcg                                                                                     <  2:503951/150‑1 (MQ=255)                                                             acacAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑Cggatcggccatgtgcggcatggcgatcaggaac                                                                                                                 >  1:605284‑M1/1‑89 (MQ=255)                                                             acacAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑Cggatcggccatgtgcggcatggcgatcaggaac                                                                                                                 <  2:605284‑M1/122‑34 (MQ=255)                                                              cacaAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCGCGTATATCGTCGa                                                                                    <  2:277787/150‑1 (MQ=255)                                                               acaAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAg                                                                                   >  1:1002877/1‑150 (MQ=255)                                                                 aaaGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGca                                                                                 >  2:1074691/1‑150 (MQ=255)                                                                        aCCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGAT‑CCTGATCGCCCTGCCTCACATAGCCGATCCGACCTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAg                                                                          >  2:305895/1‑150 (MQ=255)                                                                            tGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATg                                                                      <  2:194372/150‑1 (MQ=255)                                                                                  tctcGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCa                                                                >  2:32585/1‑150 (MQ=255)                                                                                    tcGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATg                                                              <  2:545878/150‑1 (MQ=255)                                                                                     cGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATgg                                                             <  1:794068/150‑1 (MQ=255)                                                                                       ctacttGGCGTCACGCTATCCCCCATGAAACACCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGTCGATCCGAACTTCGCCCAGACCCTCCCGTATATCGTCGAGCACAATGTGCAGGGTGTCATGTGc                                                           <  2:450772/145‑1 (MQ=255)                                                                                        cACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGAcc                                                                                                     <  1:910061/107‑1 (MQ=255)                                                                                        cACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGAcc                                                                                                     >  2:910061/1‑107 (MQ=255)                                                                                           cTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATg                                                              >  1:404561/1‑143 (MQ=255)                                                                                           cTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATg                                                              <  2:404561/143‑1 (MQ=255)                                                                                           cTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCtgg                                                       >  2:537169/1‑150 (MQ=255)                                                                                           cTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCtgg                                                       >  1:716882/1‑150 (MQ=255)                                                                                            tGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCtggt                                                      <  1:537169/150‑1 (MQ=255)                                                                                                       tATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGAc                                           <  2:716882/150‑1 (MQ=255)                                                                                                       tATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGAc                                           <  2:526855/150‑1 (MQ=255)                                                                                                       tATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGAATATCGCCCAGCACAATGATCATGGCTCCATGGGCCTGGTGGCCAACCGAc                                           >  2:1030194/1‑150 (MQ=255)                                                                                                         tCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACca                                         <  2:786490/150‑1 (MQ=255)                                                                                                            accATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAg                                      <  2:957328/149‑1 (MQ=255)                                                                                                               aTGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGaa                                   >  2:775835/1‑150 (MQ=255)                                                                                                                tGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAAc                                  <  1:778428/150‑1 (MQ=255)                                                                                                                   aaaCCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGa                               >  1:542777/1‑150 (MQ=255)                                                                                                                   aaaCCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGa                               <  1:723109/150‑1 (MQ=255)                                                                                                                        cTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTg                          >  1:555028/1‑150 (MQ=255)                                                                                                                        cTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTg                          >  1:654790/1‑150 (MQ=255)                                                                                                                         tCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATgg                                                             <  2:980445/114‑1 (MQ=255)                                                                                                                         tCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATgg                                                             >  1:980445/1‑114 (MQ=255)                                                                                                                             aCCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCgc                     >  2:809945/1‑149 (MQ=255)                                                                                                                                cAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACAt                  >  1:1016024/1‑150 (MQ=255)                                                                                                                                    tACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGC‑GATCAggaactggtgcttgaggtagctgggtgcgagggttttcatgggggatagtgtggcgccaggtggcgagactgacaaggtgggctttctctcggttctgccagcc             <  2:62105‑M2/150‑105 (MQ=255)                                                                                                                                      ccTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGa            <  1:849695/150‑1 (MQ=255)                                                                                                                                      ccTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGa            <  1:32585/150‑1 (MQ=255)                                                                                                                                       cTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAg           <  2:1016024/150‑1 (MQ=255)                                                                                                                                        tCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGTGGACAATGAGCATGGCGCCATGGGCATGGCGGACAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGc          >  1:519306/1‑150 (MQ=255)                                                                                                                                              aCCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCAAGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGCAACTgc    >  1:912116/1‑150 (MQ=255)                                                                                                                                               ccAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCgaactggtgcttgaggtagctgggtgcgagggttttcatgggggatagtgtggcgccaggtggcgagactgacaaggtgggctttgtgtcgcttttgccagccccttcgcgggc   <  2:1097527‑M2/150‑115 (MQ=255)                                                                                                                                                cAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGCCCCTCACGTATATCGTCGAGCACAACTAGCGGGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGCAACTgcgc  >  1:412263/1‑150 (MQ=255)                                                                                                                                                cAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGa                                    <  2:775866/116‑1 (MQ=255)                                                                                                                                                cAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGa                                    >  1:775866/1‑116 (MQ=255)                                                                                                                                                  gTT‑CCTGATCGCCATGCCGCACATGGCCGATCCgaactggtgcttgaggtagctgggtgcgagggttttcatgggggatagtgtggcgccaggtggcgagactgacaaggtgggctttgtgt                            <  2:605284‑M2/122‑90 (MQ=255)                                                                                                                                                  gTT‑CCTGATCGCCATGCCGCACATGGCCGATCCgaactggtgcttgaggtagctgggtgcgagggttttcatgggggatagtgtggcgccaggtggcgagactgacaaggtgggctttgtgt                            >  1:605284‑M2/1‑33 (MQ=255)                                                                                                                                                   tt‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCtggtg                                                     >  1:961854/1‑96 (MQ=255)                                                                                                                                                   tt‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCtggtg                                                     <  2:961854/96‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                 GCTGAAGCCTGTGGAGTATCGGCGGGAGCGGGCATGCCCGCGAAGGGGCTGGCAAAAGCGACACAAAGCCCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAGTT‑CCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCAACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGCAACTGCGC  >  NC_002947/5692647‑5692939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.