New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5786528 =	33 (0.760)	4 (0.110)	3/206	NT	13.0%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786613 =	27 (0.770)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin

CGGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACT  >  NC_002947/5786380‑5786677                                                                                                                                                     |                                                                                                                                                       gctcaacagcacatcctttttgcagagcacgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttg                                                                                                                                                       >  2:181697‑M1/149‑150 (MQ=255)   tcaacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtg                                                                                                                                                     >  2:824701‑M1/147‑150 (MQ=255)   tcaacagcacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtg                                                                                                                                                     <  1:494327‑M1/4‑1 (MQ=255)   ggggACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCGGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTG                                                                                                                                                     <  2:805488‑M1/150‑1 (MQ=255)      gACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGA                                                                                                                                                  <  1:727701‑M1/150‑1 (MQ=255)          cacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGcgggatctg                                                                                                                                              >  2:801233‑M1/140‑146 (MQ=255)          cacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCgg                                                                                                                                              <  2:518396‑M1/11‑1 (MQ=255)          cacatcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCgg                                                                                                                                              <  2:1121600‑M1/11‑1 (MQ=255)          aCAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGG                                                                                                                                              <  1:488540‑M1/150‑1 (MQ=255)          aCAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCGGTGGGAGCGG                                                                                                                                              <  2:46298‑M1/150‑1 (MQ=255)            catcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGc                                                                                                                                            >  2:712375‑M1/138‑150 (MQ=255)            catcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGc                                                                                                                                            >  2:1129583‑M1/138‑150 (MQ=255)            catcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcgggcattgcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGc                                                                                                                                            >  2:239051‑M1/138‑150 (MQ=255)            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGC                                                                                                                                            >  2:445739‑M1/1‑150 (MQ=255)            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGC                                                                                                                                            >  1:791546‑M1/1‑150 (MQ=255)            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGC                                                                                                                                                <  2:789119‑M1/146‑1 (MQ=255)            aGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTACTGATTAGCGCCGAATCCTGTGGGAGC                                                                                                                                                >  1:789119‑M1/1‑146 (MQ=255)             gTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCG                                                                                                                                           >  2:675949‑M1/1‑150 (MQ=255)              tcctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGt                                                                                                                                          >  1:535347‑M1/136‑150 (MQ=255)                ctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                        <  2:1033719‑M1/17‑1 (MQ=255)                ctttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGc                                                                                                                                        >  2:426400‑M1/134‑150 (MQ=255)                 tttttgcagcgaccgcatttcggcgcatcgcccaggcgctcggcgggcaggcggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGcc                                                                                                                                       <  2:642019‑M1/18‑1 (MQ=255)                       aCGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGACCCCTGTGGGAGCGGGCACGCCCGCtcc                                                                                                                                 <  1:704415‑M1/150‑4 (MQ=255)                           cTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAACCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAg                                                                                                                             <  2:324542/150‑1 (MQ=255)                                ccAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGTACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                        >  1:245159/1‑150 (MQ=255)                                ccAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCACCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                        >  1:205732/1‑150 (MQ=255)                                  aaGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGt                                                                                                                      >  1:116291/1‑150 (MQ=255)                                     tCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAt                                                                                                                   >  2:361112/1‑150 (MQ=255)                                       cTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATgg                                                                                                                 >  2:380492/1‑150 (MQ=255)                                          gCCAGGCCTTTCGGGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCTCCCGAAGCAGGCAACGTGATGGAtt                                                                                                              <  1:873791/150‑1 (MQ=255)                                            cAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGc                                                                                                            >  1:1035482/1‑150 (MQ=255)                                                  tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCCGTGGGAGCGGGCGTGCCCGCGAAcaccggcgaagccggtgcaatccatca                                                                                                      >  2:603084‑M1/1‑123 (MQ=255)                                                     cGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAcaccggcgaagccggtgcaatccatcacgt                                                                                                   >  2:914978‑M1/1‑120 (MQ=255)                                                       aGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGc                                                                                                <  2:56725/150‑1 (MQ=255)                                                       aGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGc                                                                                                <  1:360302/150‑1 (MQ=255)                                                         gAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCg                                                                                              <  2:1049762/150‑1 (MQ=255)                                                             aGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGGTTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATG‑ATGCCGACCGGCTTCGCCGGTGt                                                                                          <  1:607350‑M2/150‑2 (MQ=255)                                                                 cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGa                                                                                                                <  2:342532/125‑1 (MQ=255)                                                                 cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGa                                                                                                                >  1:342532/1‑125 (MQ=255)                                                                   ggATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAcaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgg                                                                                     <  1:914978‑M1/150‑45 (MQ=255)                                                                   gcgggtgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCgg                                                                                    >  2:351958‑M1/83‑150 (MQ=255)                                                                   gcgcttgaggccgttgcagtgggggcagcggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctCGTGGGCGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCgg                                                                                    >  2:324600‑M1/83‑150 (MQ=255)                                                                    cggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCggg                                                                                   >  1:617269‑M1/82‑150 (MQ=255)                                                                     ggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGt                                                                                                                                          >  1:444617‑M1/81‑95 (MQ=255)                                                                     ggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGt                                                                                                                                          <  2:444617‑M1/15‑1 (MQ=255)                                                                      tGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgggca                                                                                 <  1:319385‑M2/150‑11 (MQ=255)                                                                       ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                >  2:1079513‑M1/79‑150 (MQ=255)                                                                         aaGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcggggacgc                                                                              <  1:1082156‑M2/150‑14 (MQ=255)                                                                             cTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgggcacgcccgc                                                                          >  2:1035482‑M2/1‑133 (MQ=255)                                                                                cGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgggcacgcccgctcc                                                                       >  1:675949‑M2/1‑130 (MQ=255)                                                                                 gCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgggcacgcccgctccc                                                                      <  2:167409‑M2/150‑22 (MQ=255)                                                                                 gCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGG                                                                                                                                                    <  1:138370‑M1/73‑1 (MQ=255)                                                                                 gCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGG                                                                                                                                                    >  2:138370‑M1/1‑73 (MQ=255)                                                                                  ccGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGCTTGC‑ACCGGCTTCGCCGGTGttcgcgggcacgcccgctccca                                                                     >  2:67657‑M2/1‑128 (MQ=255)                                                                                    gAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCCGTGGGAGCGGGCGTGCCCGCGAAcaccggcgaagccggtgcaatccatcacgttgcctgcttcgcgggcacgcccgctcccaca                                                                    <  1:603084‑M1/150‑62 (MQ=255)                                                                                     aGCGACCGCCGGAGGGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                  <  1:445739/150‑1 (MQ=255)                                                                                        gACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGTCGTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGa                                                               >  1:789786/1‑150 (MQ=255)                                                                                              cgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                         <  2:645460/150‑1 (MQ=255)                                                                                              cgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                         >  1:645460/1‑150 (MQ=255)                                                                                                              ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGa                                                                                                                    >  2:272448/1‑76 (MQ=255)                                                                                                              ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGa                                                                                                                    <  1:272448/76‑1 (MQ=255)                                                                                                                  gAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGa                                     >  2:266417/1‑150 (MQ=255)                                                                                                                   aaaTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGTTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGaa                                    <  1:380492/150‑1 (MQ=255)                                                                                                                      tCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgg                                                                                    <  2:953871‑M2/99‑8 (MQ=255)                                                                                                                      tCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgg                                                                                    >  1:953871‑M2/1‑92 (MQ=255)                                                                                                                       cAGCTGCTCTTCCTGATTAGCACCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATga                                <  2:205732/150‑1 (MQ=255)                                                                                                                             ctctTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgaccgacc                          <  2:791546/150‑1 (MQ=255)                                                                                                                                ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                    >  1:698871/1‑121 (MQ=255)                                                                                                                                ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                    <  2:698871/121‑1 (MQ=255)                                                                                                                                ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                       >  1:1121600/1‑150 (MQ=255)                                                                                                                                ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGGGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAGCACCGGAGATGAAATGACCGACCCAc                       >  1:518396/1‑150 (MQ=255)                                                                                                                                 tCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                        <  1:233804/53‑1 (MQ=255)                                                                                                                                 tCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAAc                                                                                                                        >  2:233804/1‑53 (MQ=255)                                                                                                                                 tCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACt                      >  1:886085/1‑150 (MQ=255)                                                                                                                                   cTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTgg                    >  1:1000165/1‑150 (MQ=255)                                                                                                                                          gctccGAATGCTGCGGCAGCGGCAGTGCCCGCGCACAAGGCCACGTCATCGAATAC‑AACGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATccc             <  2:789786/147‑1 (MQ=25)                                                                                                                                              cGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGc         <  1:152584/150‑1 (MQ=255)                                                                                                                                                     tgtgGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacgggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctc  <  1:603084‑M2/150‑90 (MQ=255)                                                                                                                                                     TGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGGTGGATTGC‑ACCGGCTTCGCCGGGGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACt  <  1:1119945‑M1/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       CGGGGGACTACAGTGAAGTTCGACGGCTGCACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGC‑ACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACT  >  NC_002947/5786380‑5786677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.