New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1216187 =	47 (1.080)	4 (0.100)	4/238	NT	8.2%	coding (778/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1216232 =	45 (1.110)					coding (733/4305 nt)	PP_1061	ATP‑dependent DNA helicase

TACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTCC  >  NC_002947/1216088‑1216380                                                                                                                                                 |                                                                                                                                                     tACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCAc                                                                                                                                                 <  2:1120545/150‑1 (MQ=255)    gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCt                                                                                                                                              >  2:1000120/1‑150 (MQ=255)    gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTATTATACCAGGCCCAAGCCACCACTGCAAAATACGGCCCGCATCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCt                                                                                                                                              >  1:248277/1‑150 (MQ=255)    gTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTCCCCGGGCAAGGGTGGCCAAGCGGGCATACACCAGGCCCCAGACATCAATGGCCATCACAGCCCCCAGCGAAACCGGCTGCACTGCGATGGGCATGTCACGCt                                                                                                                                              >  2:239395/1‑150 (MQ=255)        ggCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACAACAGGCCCCAGACATCAATGGCCATCAACGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCg                                                                                                                                          <  2:12492/150‑1 (MQ=255)         gCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCCTACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGCACCCGCGGCACTTCGATGGCCAGGTCCCCCTTGCgg                                                                                                                                         >  2:379948/1‑150 (MQ=255)         gCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCgg                                                                                                                                         <  1:928818/150‑1 (MQ=255)          ccAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCggg                                                                                                                                        <  1:340386/150‑1 (MQ=255)                   gggTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCAGACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGa                                                                                                                               <  1:12616/150‑1 (MQ=255)                        ttGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCg                                                                                                                          >  1:185830/1‑150 (MQ=255)                            cGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACaa                                                                                                                      <  2:185830/150‑1 (MQ=255)                             gAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAAt                                                                                                                     <  1:222980/150‑1 (MQ=255)                              aaTACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATg                                                                                                                    <  2:863060/150‑1 (MQ=255)                                   cAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCa                                                                                                               >  1:451179/1‑150 (MQ=255)                                     gCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAgg                                                                                                             <  2:1094272/150‑1 (MQ=255)                                             cGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCg                                                                                                     >  1:87033/1‑150 (MQ=255)                                                tgtTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTa                                                                                                  >  1:144693/1‑150 (MQ=255)                                                  ttCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTAcc                                                                                                <  2:602136/150‑1 (MQ=255)                                                    cACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACcca                                                                                              <  2:446962/150‑1 (MQ=255)                                                       gggCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                                                                           >  1:9916/1‑150 (MQ=255)                                                            aGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAAc                                                                                      <  1:1000120/150‑1 (MQ=255)                                                             gggTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACt                                                                                     <  2:27974/150‑1 (MQ=255)                                                              ggTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCGTCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACtg                                                                                    >  2:718350/1‑150 (MQ=255)                                                                  gCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGcc                                                                                >  1:918459/1‑150 (MQ=255)                                                                   ccAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCCGGGACGCCCGCTACCCACCAGAAACTGTGCCa                                                                               >  1:273721/1‑150 (MQ=255)                                                                    cAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCAc                                                                              >  2:344223/1‑150 (MQ=255)                                                                    cAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTAACGGCGGCACTTCGATGGCAAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCAc                                                                              <  1:243054/150‑1 (MQ=255)                                                                         atatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACg                                                                                                                                                <  2:284255‑M1/52‑1 (MQ=255)                                                                         atatcggccatgcccgcaagcgtgaccTGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACg                                                                                                                                                >  1:284255‑M1/28‑79 (MQ=255)                                                                             aTACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGAc                                                                     >  1:293599/1‑150 (MQ=255)                                                                              tACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGAcc                                                                    >  1:412019/1‑150 (MQ=255)                                                                                cacCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCgg                                                                  <  1:125416/150‑1 (MQ=255)                                                                                 acCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCggg                                                                 >  2:750455/1‑150 (MQ=255)                                                                                   cAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCg                                                               >  1:292053/1‑150 (MQ=255)                                                                                        cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                                                                           >  1:1074357/1‑117 (MQ=255)                                                                                        cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACccacca                                                                                           <  2:1074357/117‑1 (MQ=255)                                                                                        cccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTggg                                                          <  2:144693/150‑1 (MQ=255)                                                                                         ccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGt                                                         >  2:345940/1‑150 (MQ=255)                                                                                         ccAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGCTGGGt                                                         >  2:56494/1‑150 (MQ=255)                                                                                            gACATCAATGGCCATCAGCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGc                                                      <  1:379948/150‑1 (MQ=255)                                                                                             cgtgacctggccatcgaagtgccgccggtaccgctgggggcggtgatggccaGGTCACGCTTGCGGGCATGGCCGatat                                                                                                                            >  1:284255‑M2/53‑79 (MQ=255)                                                                                             cgtgacctggccatcgaagtgccgccggtaccgctgggggcggtgatggccaGGTCACGCTTGCGGGCATGGCCGatat                                                                                                                            <  2:284255‑M2/27‑1 (MQ=255)                                                                                                  aaTGGACATCAAAGCACCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCCCTACCAACCAGAAACTATGCCACCCGGTCGACCGGGCGCTGGGTAGCGGACaa                                                >  2:449348/1‑149 (MQ=255)                                                                                                     ggccatcgaagtgccgccggtaccgctgggggcggtgatggccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGcc                                             >  1:92064‑M2/45‑150 (MQ=255)                                                                                                       ccatcgaagtgccgccggtaccgctgggggcggtgatggccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGa                                           <  2:92064‑M2/108‑1 (MQ=255)                                                                                                             ccGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGAAGCGTCTGCCACCCACCAGAAACTGTGCCACCCGTTCGAACGGGGGTAGGGCAGTGAACTGACCGATAcgcc                                     >  1:346658/1‑150 (MQ=255)                                                                                                                    cAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTgg                              <  2:466533/150‑1 (MQ=255)                                                                                                                    cAGCGGCTCCGGCGGCTCTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCGACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGTGTAGCGGACAGGGCGATACGCCGCAGTgg                              <  2:569901/150‑1 (MQ=255)                                                                                                                      gCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACa                                                 >  1:890183/1‑129 (MQ=255)                                                                                                                      gCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACa                                                 <  2:890183/129‑1 (MQ=255)                                                                                                                                  gcACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAgg                <  2:412019/150‑1 (MQ=255)                                                                                                                                    aCTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCt              >  1:934776/1‑150 (MQ=255)                                                                                                                                        cGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCa          <  2:918459/150‑1 (MQ=255)                                                                                                                                         gatggccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAg         <  1:154552‑M2/142‑1 (MQ=255)                                                                                                                                             gccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGt     <  2:110962‑M2/146‑1 (MQ=255)                                                                                                                                              ccaGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGtt    >  1:871714‑M2/4‑150 (MQ=255)                                                                                                                                                aGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTcc  <  2:292053‑M2/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     TACGTTCGGCCAGGCGCCGGGTGTTGACGAATACCAGCGTGGTGCGGTGTTCACGGGCAAGGGTGGCCAAGCGGTCATACACCAGGCCCCAGACATCAATGGCCATCACCGCCCCCAGCGGTACCGGCGGCACTTCGATGGCCAGGTCACGCTTGCGGGCATGGCCGATATCGACAATGGCGCAGGGACGCCCGCTACCCACCAGAAACTGTGCCACCCGTTCGACCGGGCGTTGGGTAGCGGACAGGCCGATACGCCGCAGTGGCTTTTTGCACAAGGCTTGCAGGCGTTCC  >  NC_002947/1216088‑1216380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.