New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2683380 = | 44 (1.020) | 3 (0.080) | 3/220 | NT | 7.5% | intergenic (+13/+100) | prpE/PP_2352 | propionyl‑CoA synthetase/hypothetical protein |
? | NC_002947 | 2683465 = | 36 (0.960) | intergenic (+98/+15) | prpE/PP_2352 | propionyl‑CoA synthetase/hypothetical protein |
CTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACAT > NC_002947/2683320‑2683613 | gtGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAgg < 2:1080171/149‑1 (MQ=255) cTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAgg < 2:1060529/150‑1 (MQ=255) tGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTAAGGc > 1:1115137/1‑150 (MQ=255) ggAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACtt > 1:1035774/1‑149 (MQ=255) ggAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTg > 1:663410/1‑150 (MQ=255) aGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAg < 1:864759/150‑1 (MQ=255) gCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgg < 2:422862/150‑1 (MQ=255) gCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGCTGGTTCGGCAGACGACGGCGTGTAGGAGCGGTGTTATCCGCCAAAGGCCCATCTCCGGCACTGCAGGCTCAgg > 2:945591/1‑150 (MQ=255) ggTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg < 2:558612/150‑1 (MQ=255) gTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAggggg < 2:1035774/150‑1 (MQ=255) gCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCt > 1:615475/1‑150 (MQ=255) gCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCt > 1:863329/1‑150 (MQ=255) gATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 2:629191/150‑1 (MQ=255) gATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 1:174947/150‑1 (MQ=255) aTTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTg > 1:710196/1‑150 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg < 1:19059/133‑1 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAgggg > 2:19059/1‑133 (MQ=255) ccAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTg > 2:1031775/1‑150 (MQ=255) cggggCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 1:731697/148‑1 (MQ=255) cAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 2:638351/150‑1 (MQ=255) gTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc < 2:797339/142‑1 (MQ=255) gTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGc > 1:797339/1‑142 (MQ=255) aTGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt > 1:782831/1‑130 (MQ=255) aTGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGt < 2:782831/130‑1 (MQ=255) gTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCgg < 1:1087226/150‑1 (MQ=255) aCCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGc > 1:910553/1‑96 (MQ=255) aCCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGc < 2:910553/96‑1 (MQ=255) cTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAg < 1:645792/92‑1 (MQ=255) cTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAg > 2:645792/1‑92 (MQ=255) GATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCa > 2:507618‑M1/1‑150 (MQ=255) ATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAg < 1:829928‑M1/150‑1 (MQ=255) TGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCGATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAgg > 1:286527‑M1/1‑150 (MQ=255) CCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCg < 1:983939‑M1/150‑1 (MQ=255) cctttcgcgggtaaacacgctcctacacgacggcctctgccgaaccaccgatgcgcgtgccgcccgcgaaagggccatcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCgg > 1:393080‑M2/80‑150 (MQ=255) ctttcgcgggtaaacccgctcctacacgacggcctctgccgaaccaccgatgcgcgtgccgcccgcgaaagggccatcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGc > 1:263772‑M2/79‑150 (MQ=255) CTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGc < 2:252665‑M1/150‑1 (MQ=255) tttcgcgggtaaacccgctcctacacgacggcctctgccgaaccaccgatgcgcgtgccgcccgcgaaagggccatcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGcc > 2:217347‑M2/78‑150 (MQ=255) GCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACCCATCAGGTCGGCCAGCg > 1:933692‑M1/1‑150 (MQ=255) gcgcATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTAAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAgg < 2:1115137/150‑1 (MQ=255) gcATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGct > 1:886226/1‑150 (MQ=255) ttCGGCAGAGGCCGTCGTGTAGGAGCGGCTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGc < 1:945591/150‑1 (MQ=255) tCGGCAGAGGCCGTAGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCCGCGGG‑TACGCCTCAGGTCGGCCAGCGGGCCGCCCAGGCTCTATTCCAGCg > 2:411875/1‑150 (MQ=255) ggCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGa < 2:863329/150‑1 (MQ=255) cgtGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATg < 2:829928/150‑1 (MQ=255) gtgtAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGa < 1:828137/150‑1 (MQ=255) aGCGGGTTTACCCGCGAAAGGGCCCTCTCACGCACTGCAGGCTCAGGGCGCAATCTGGTGCAGTTGCCCCACCCG‑CCTGCGGG‑TACGCATCAGTTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCAc < 1:411875/150‑1 (MQ=255) gCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCAcc > 2:978163/1‑150 (MQ=255) gCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCAcc > 2:948748/1‑150 (MQ=255) gCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCAcc > 2:1023334/1‑150 (MQ=255) cgcgaaagggccatcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCgatctcc < 2:663410‑M2/135‑4 (MQ=255) cgcgaaagggccatcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTg < 2:711709‑M2/135‑1 (MQ=255) gggCCATCTCAGCCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCCCCCGCGGTACGAAAAACGCCGC‑GG‑CGGCCAGCGGGGCGCCCCGGATCACTTCCAGCGGATGTTTGCCTATTACAATCACCCGTCGATCCTGGTCATAc < 1:252665/150‑1 (MQ=255) catcTCCGGCACTGCAGGCTCATGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTTCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGca > 2:515540‑M2/5‑150 (MQ=255) atcTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGcac < 2:983939‑M2/147‑1 (MQ=255) cTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACAt < 2:615475‑M2/149‑1 (MQ=255) | CTGGGGGAGATCGAAGCGGTGCTGGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCG‑GCTGCGGG‑TACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACAT > NC_002947/2683320‑2683613 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |