New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2898241 =	38 (0.880)	4 (0.090)	4/250	NT	9.4%	coding (423/1413 nt)	PP_2552	DOPA decarboxylase
	?	NC_002947	2898266 =	40 (0.940)					coding (448/1413 nt)	PP_2552	DOPA decarboxylase

TGTCCTGGCAATCCAGCCCGGCCCTGAGCGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAGGTTTTGGCC  >  NC_002947/2898126‑2898401                                                                                                                                              |                                                                                                                                        tGTCCTGGCAATCCACAACGGCCATGACCGCACCGGAAGCACCCACCCCCGACCGGCGTCGCCAGGTGCTGGGCCTGGCTGG‑CCAGCGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCACGGTGGCGCTGATCAGTGCCCGTg                                                                                                                                >  2:561809/1‑150 (MQ=255)     cctggtccaccgagctgtgggcgggggcgttgacagacacgatcaaaggcttgggctcggcctgcaggccaccacgtaccagggcgtagtcagtggcgcgttcacgggcactGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAAc                                                                                                                             >  2:497556‑M1/113‑150 (MQ=255)      tGGCAATCCAGCCCGGCCCTGAGCGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAAcgc                                                                                                                           >  1:38166/1‑150 (MQ=255)          aaTCCAGCCCGGCCCTGAGCGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCa                                                                                                                       >  2:1083814/1‑150 (MQ=255)                        cTGAGCGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTg                                                                                                         <  2:1029224/150‑1 (MQ=255)                             cGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACg                                                                                                    <  1:403610/150‑1 (MQ=255)                                aCTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACgtgg                                                                                                 <  1:525133/150‑1 (MQ=255)                                aCTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGAATAG‑ATGGCGGGACCGCTGGGGGTGGGTGATCAAGGCCACTGCCTCGACCAGCACCCTGGGGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACgtgg                                                                                                 <  1:805705/150‑1 (MQ=255)                                  tGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACgtggtg                                                                                               <  2:392015/150‑1 (MQ=255)                                       gaaACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTg                                                                                          >  1:406516/1‑150 (MQ=255)                                         aaCCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCa                                                                                        <  1:1083814/150‑1 (MQ=255)                                               ccTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGa                                                                                  <  1:26768/150‑1 (MQ=255)                                                     cTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCaa                                                                            <  2:897728/150‑1 (MQ=255)                                                           gcgcCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCttt                                                                      <  2:244025/150‑1 (MQ=255)                                                           gcgcCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCttt                                                                      <  1:487764/150‑1 (MQ=255)                                                                gcctgcaggccaccacgtaccagggcgtagtcagtggcgcgttcacgggcactGACCAGCACCCTGGTGGCGCTGATCa                                                                                                                                         >  2:1126160‑M1/54‑79 (MQ=255)                                                                gcctgcaggccaccacgtaccagggcgtagtcagtggcgcgttcacgggcactGACCAGCACCCTGGTGGCGCTGATCa                                                                                                                                         <  1:1126160‑M1/26‑1 (MQ=255)                                                                aGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCg                                                                 >  1:506532/1‑150 (MQ=255)                                                                   tGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTCTAGCgtgt                                                              <  2:274555/150‑1 (MQ=255)                                                                              tCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcc                                                   >  2:1084453/1‑150 (MQ=255)                                                                                  g‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACTAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcccacg                                               >  1:819991/1‑150 (MQ=255)                                                                                  g‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTAt                                                            <  2:904503/137‑1 (MQ=255)                                                                                  g‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTAt                                                            >  1:904503/1‑137 (MQ=255)                                                                                     cAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcccacgcc                                             >  2:832907/1‑150 (MQ=255)                                                                                     cAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcccacgcc                                             >  1:610450/1‑150 (MQ=255)                                                                                      agtggagtggGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcccacgccc                                            >  1:311473/1‑150 (MQ=255)                                                                                      agtggagtggGGTGATCCAGGACAATGGACCTACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGcgcccacgccc                                            >  1:309138/1‑150 (MQ=255)                                                                                         ggagtggGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGAAATTTACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCcaca                                         <  2:38166/150‑1 (MQ=255)                                                                                                ggTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGt                                  <  1:832907/150‑1 (MQ=255)                                                                                                  tGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTgg                                >  2:304537/1‑150 (MQ=255)                                                                                                     tCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACa                             >  2:788953/1‑150 (MQ=255)                                                                                                        gttcacgggcactgatcagcgccaccagggtgctggtcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTCTGTCAACGCCCCCGCCCACAGCTCGGTGGACCAgg                          >  2:497556‑M2/39‑150 (MQ=255)                                                                                                        aGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAgg                          <  2:207140/150‑1 (MQ=255)                                                                                                          gACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCt                        <  2:311473/150‑1 (MQ=255)                                                                                                          gACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCACGACGCTCTTCCGCTGTCTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCt                        <  2:309138/150‑1 (MQ=255)                                                                                                           acacTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTg                       <  1:304537/150‑1 (MQ=255)                                                                                                               tGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCAct                   >  1:463934/1‑150 (MQ=255)                                                                                                                   tCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCgcccacgcccac                                          <  1:1106116/123‑1 (MQ=255)                                                                                                                   tCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCgcccacgcccac                                          >  2:1106116/1‑123 (MQ=255)                                                                                                                    tgatcagcgccaccagggtgctggtcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGc                                                                                     >  2:1126160‑M2/27‑79 (MQ=255)                                                                                                                    tgatcagcgccaccagggtgctggtcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGc                                                                                     <  1:1126160‑M2/53‑1 (MQ=255)                                                                                                                       tcagcgccaccagggtgctgatcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAg           >  1:772860‑M2/24‑150 (MQ=255)                                                                                                                               cTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAGGTTTTGGc   >  2:156179/1‑150 (MQ=255)                                                                                                                               cTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAGGTTTTGGc   <  1:156179/150‑1 (MQ=255)                                                                                                                                tggtggCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAGGTTTTGGcc  <  1:1110073/150‑1 (MQ=255)                                                                                                                                 ggtggCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGc                                                                                             <  2:832798/58‑1 (MQ=255)                                                                                                                                 ggtggCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGc                                                                                             >  1:832798/1‑58 (MQ=255)                                                                                                                                       gcTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCaa                                                                            <  2:709564/69‑1 (MQ=255)                                                                                                                                       gcTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCaa                                                                            >  1:709564/1‑69 (MQ=255)                                                                                                                                              |                                                                                                                                        TGTCCTGGCAATCCAGCCCGGCCCTGAGCGAACTGGAAGAAACCACCCTCGACTGGCTGCGCCAGTTGCTTGGCCTGTCTGG‑CCAGTGGAGTGGGGTGATCCAGGACACTGCCTCGACCAGCACCCTGGTGGCGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAGGTTTTGGCC  >  NC_002947/2898126‑2898401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.